Variovorax sp. PMC12: C4F17_30055
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Entry
C4F17_30055 CDS
T05380
Symbol
lpxO
Name
(GenBank) lipid A hydroxylase LpxO
KO
K12979
beta-hydroxylase [EC:1.14.11.-]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00540
Lipopolysaccharide biosynthesis
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
C4F17_30055 (lpxO)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
C4F17_30055 (lpxO)
Lipopolysaccharide biosynthesis proteins [BR:
vam01005
]
Lipid A
C4F17_30055 (lpxO)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Asp_Arg_Hydrox
Cupin_2
Motif
Other DBs
NCBI-ProteinID:
AVQ85277
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All DBs
Position
2:560112..561008
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AA seq
298 aa
AA seq
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MKWVILAIFALSALYVHFRGQVRHRFFRQLSDHSTFLAPLNVFMYLFSKVPGTPYLSPAQ
FPEMRILEENWEVIREEALAMRNGGSIKASSQFNDVGFNSFFKSGWKRFYLKWYDEAHPS
AAVLCPRTTELLKGIGTIKAAMFAELPPGSRLVRHRDPFAGSLRYHLGLWTPGVEGCYID
VDGQRYHWRDGEAVVFDETFIHYAENTTDHDRVILFCDIERPLKYRWASAVNRWFAKNLL
AAASSPNDAGDKTGGINRAFKYIYQIRVVGKRLKAWDKRVYYLVKWAIFGGLALWIFW
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgaagtgggtcattcttgccatcttcgcgctcagcgcgctctacgttcatttccgcggc
caggtacggcatcgtttcttcagacagctctctgatcactcgaccttcctcgccccgctg
aacgtcttcatgtaccttttctcgaaggtacccggtacgccgtacctgtcgcccgcgcag
ttccccgagatgcgcatcctcgaggagaactgggaagtcatccgcgaggaagccctggcc
atgcgcaacggcggcagcatcaaggcctcgagccagttcaacgacgtgggcttcaactcg
ttcttcaagagcggctggaagcgcttctacctcaagtggtacgacgaggcgcatccctcg
gccgccgtgttgtgcccgcgcacgaccgagctgctcaagggcatcggcaccatcaaggcc
gcgatgttcgcggagctgcccccgggcagccgcctggtgcgccaccgcgatccgttcgcg
ggctcgctgcgctaccacctgggcctgtggacgccgggcgtcgagggctgctacatcgac
gtggacggccagcgctaccactggcgcgacggcgaggcggtggtgttcgacgagaccttc
atccactacgccgagaacacgaccgaccacgatcgcgtgatcctgttctgcgacatcgag
cgcccgttgaagtaccgctgggccagtgcggtgaaccgctggttcgccaagaacctgctt
gccgcggccagttcgcccaacgacgcgggcgacaagaccggcggcatcaaccgcgcattc
aagtacatctaccagatccgcgtggtcggcaagcgcctgaaggcatgggacaagcgggtg
tactacctcgtgaagtgggccatcttcggcggcctggccctctggatcttctggtaa
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