Variovorax sp. PMC12: C4F17_30265
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Entry
C4F17_30265 CDS
T05380
Name
(GenBank) C4-dicarboxylate ABC transporter
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_30265
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_30265
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_30265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
DUF3606
Motif
Other DBs
NCBI-ProteinID:
AVQ85784
LinkDB
All DBs
Position
2:complement(608227..609276)
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AA seq
349 aa
AA seq
DB search
MTIAHRPHRTALAPAAVAIAAALALCTPAAQAQDKPVQLKLSSWVPAQHPLNPALQAWAD
DIKKESGGTITAILFPSEQLGKAFDHYDMARDGIADFSYVNPGYQPGRFPVMAGASLPFL
FANGKEGSAAIDAWYRNYAAKEMKDVKYCFAFVHDPGTFHSRKKITVPGDVKGLKVRPAT
STVGQLITSLGGTNVQASAPESRDMLERGVADAITFPWGSIGLFGIDKVVKYHMDAPLYV
TPFVWVMNKGKYDAMSTAQKKVIDDHCTSEWAQKVAGPWADFEFAGHAKMAALSGHEIYK
LTPEQLDAWRKAAAPSEAQWAESVKKVGEDPKAVMDALKASLAKYKSAL
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacaatcgcccaccgcccccaccgcacggcactggccccggccgccgtcgccatcgcc
gccgcccttgcgctctgcacgcccgccgcgcaggcacaggacaaacccgtgcagctcaag
ctgtcgagctgggtgcccgcgcagcatccgctcaaccccgcgctgcaggcgtgggccgac
gacatcaagaaggagtccggcggcaccatcaccgcgatcctgtttccgtcggagcagctc
ggcaaggccttcgaccactacgacatggcgcgcgacggcatcgccgacttctcctacgtg
aaccccggctaccagcccggccggtttccggtgatggccggcgcgtcgctgcccttcctg
ttcgccaacggcaaggaaggctcggccgccatcgacgcctggtaccgcaactacgcggcc
aaggaaatgaaggacgtgaagtactgcttcgccttcgtgcatgaccccggcaccttccat
tcgcgcaagaagatcaccgtgcccggcgacgtcaagggcctgaaggtgcgcccggccacc
agcaccgtgggccagctcatcacctcgctgggcggcaccaacgtgcaggcctcggcgccc
gagtcgcgcgacatgctggagcgcggcgtggccgacgccatcaccttcccgtggggctcc
atcggcctgttcggcatcgacaaggtcgtgaagtaccacatggatgcgccgctgtacgtc
acccccttcgtgtgggtcatgaacaaaggcaagtacgacgccatgtccaccgcgcagaag
aaggtgatcgacgaccactgcaccagcgaatgggcgcagaaggtggccgggccttgggcc
gacttcgagttcgccggccacgccaagatggcggcgctttcgggccacgagatctacaag
ctcacgccggagcagctcgacgcatggcgcaaggccgcggcgccctcggaagcgcagtgg
gccgagagcgtgaagaaggtcggcgaagacccgaaggcggtgatggatgcgttgaaggcc
agccttgccaagtacaagtcggcgctctga
DBGET
integrated database retrieval system
