Variovorax sp. PMC12: C4F17_30270
Help
Entry
C4F17_30270 CDS
T05380
Name
(GenBank) alpha-hydroxy-acid oxidizing protein
KO
K15054
(S)-mandelate dehydrogenase [EC:
1.1.99.31
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00627
Aminobenzoate degradation
vam01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
C4F17_30270
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.31 (S)-mandelate dehydrogenase
C4F17_30270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FMN_dh
NMO
IMPDH
Glu_synthase
ThiG
His_biosynth
TMP-TENI
DHO_dh
LigB
Motif
Other DBs
NCBI-ProteinID:
AVQ85315
UniProt:
A0A2P1VJF3
LinkDB
All DBs
Position
2:complement(609314..610555)
Genome browser
AA seq
413 aa
AA seq
DB search
MTLLLNVDDHRRRARRVLPRLVFDYVDGGAEDERCLQRNRDAIEALPLIPECLRDTTTVD
TGIELFGRRWRAPFAVAPIGLAGLVRPRADALLAGAAQAARVPFILSTASNTRIEDVRTA
APDATLWMQLYVMGERAIAERIVRRARAAGFEALVLTVDVPVSGLRERDLRHGFRVPMRL
TPGTLFDMARHPAWLLRLARHGMPRFENLLPDEDGAPVSAQTQAALLSRTMDRALTWESL
GWLRKLWDGPLLVKGLLGAEDARRAVRHGADGIVVSNHGGRQLDAAPASIAALPAMVDAV
NGRIPVLMDGGIRRGSDIVKALALGARGVLVGRAPVYGLACDGGRGALSVLQMLIQETER
TMTLLGATQVRELGPHHVDRPSPRSPDEQEGVPTRPKENTHGKPSIYPARATA
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaccttgctgctcaacgtggacgaccaccggcgccgtgcgcgccgtgtgctgccgcgc
ctggtgttcgactatgtcgacggcggcgcggaagacgaacgctgcctgcagcgcaaccgc
gacgcaatcgaagcgctgccgctcattccggaatgcctgcgcgacaccaccacggtggac
accggcatcgaactgttcgggcgccgctggcgcgcgccgttcgcggtcgcgcccatcggg
ctggccgggctggtacggccgcgcgccgacgccttgctggccggagccgcgcaggctgcg
cgcgtgcccttcatcctctcgaccgcatcgaacacccgcatcgaggacgtgcgcaccgcc
gcgcccgacgccacgctgtggatgcagctctacgtgatgggcgagcgcgccattgccgaa
cgcatcgtgcgccgcgcgcgcgccgcgggcttcgaggcgctggtgctcacggtggacgtg
ccggtgagcggcctgcgcgaacgcgacctgcgacacggctttcgcgtgccgatgcggctc
acgcccggcacactgttcgacatggcgcggcacccggcctggctgctgcggcttgcgcgc
cacggcatgccgcgcttcgagaacctgctgcccgatgaagacggcgcacccgtctccgcg
cagacgcaggccgcgctgctctcgcgcaccatggaccgcgcgctcacctgggaaagcctg
ggctggctgcgcaagctctgggacggcccgttgctcgtcaagggcctgctgggcgcggaa
gacgcacggcgtgccgtgcgccacggcgccgacggcatcgtggtctccaaccacggcgga
cgccagctcgacgccgcgccagccagcatcgccgccctgcccgcgatggtcgacgccgtg
aacgggcggatccccgtgctcatggacgggggcatccggcgcggaagcgacatcgtgaag
gcgctcgcgctcggcgcgcgcggagtgctggtcgggcgcgccccggtctacggactggcg
tgcgacggcgggcgcggtgcgctgtcggtgctgcagatgctcatccaggagaccgaacgc
acgatgaccctgctgggcgccacgcaggtgcgcgagctcggcccgcatcacgtggacagg
ccttcgccgcgttcgcccgacgaacaggaaggcgtgccaacgcgacccaaggaaaacacg
cacgggaaaccctccatttaccccgcgcgcgcgactgcctag
DBGET
integrated database retrieval system