Variovorax sp. PMC12: C4F17_30300
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Entry
C4F17_30300 CDS
T05380
Symbol
xdhA
Name
(GenBank) xanthine dehydrogenase small subunit
KO
K13481
xanthine dehydrogenase small subunit [EC:
1.17.1.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00230
Purine metabolism
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam01232
Nucleotide metabolism
Module
vam_M00958
Adenine ribonucleotide degradation, AMP => Urate
vam_M00959
Guanine ribonucleotide degradation, GMP => Urate
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
C4F17_30300 (xdhA)
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.4 xanthine dehydrogenase
C4F17_30300 (xdhA)
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Motif
Pfam:
FAD_binding_5
CO_deh_flav_C
Fer2_2
Fer2
Motif
Other DBs
NCBI-ProteinID:
AVQ85321
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Position
2:617658..619280
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AA seq
540 aa
AA seq
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MSTDSSKIQPIRFFHRGKIVDVTGVHPTRSVLDWLREDARCTGTKEGCNEGDCGACTVVI
GELATDPQAPGAVDGLSLQTVNACIQFLPTLHGKALFTVEDLKAQCQAAPHRTEKAKDGK
HAVHTLHPVQQAMVDCHGSQCGFCTPGFVMSLWATYEHHQAGGTQPTRQQLADDLSGNLC
RCTGYRPILDAGQRMFDLPSVRLDTRPVVAALTALRDDGAALSYAAPLGARMDHFHAPRT
LAQLAALRERKPRAQLLAGSTDVGLWVNKQFRDLGDIIYVGDVAEMKAIEDRPDNGGELY
IGAGASLEAAFGALVERVPSLAEVWLRFASPPIRHAGTMGGNVANGSPIGDSPPVLMSLD
AQIELRRGDVVRRMPLPDFYLDYMKNQLQPGEFVQGLAVPHAAMKRQVRAYKISKRFDCD
ISALCAGFAIELEAGGDTVKAVRLAFGGMAATVKRATNAEAALLGKPWTQASVATAKLAL
AQDFKPLSDMRASADYRLQVAQNLIQRLWLETRAEDALSLEETSVWSVMPHATPATAAGV
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccgacagcagcaagattcaaccgatccgcttcttccatcgcggaaagatcgtc
gacgtcaccggcgtccacccgacccgttccgtgctcgactggctgcgcgaggacgcccgc
tgcaccggcaccaaggaaggctgcaacgaaggtgactgcggtgcctgcaccgtcgtcatc
ggagaactggccaccgatccccaggcgccgggcgcggtggacggcctgagcctgcagacc
gtcaacgcatgcatccagttcctgcccaccctgcacggcaaggccctgttcacggtcgag
gacctcaaggcccagtgccaggccgcgccccacaggaccgagaaggccaaggacggcaag
cacgcggtgcacacgctgcacccggtgcagcaggccatggtcgactgccacggctcccag
tgcggcttctgcacgcccggcttcgtgatgtcgctgtgggccacctacgaacaccaccag
gccgggggcacgcagcccacccgccagcagctggccgacgacctgtcgggcaacctgtgc
cgctgcaccggctaccgcccgatcctggacgccggccagcgcatgttcgacctgccttcg
gtgcgcctggacaccaggcccgtggtggctgcgctcaccgccttgcgcgacgacggcgcg
gcgctgagctacgccgccccgctcggcgcgcgcatggaccacttccacgcccccaggacc
ctggcccagctggccgccctgcgcgagcggaagccccgcgcccagctgctggccggctcg
accgatgtcggcttgtgggtcaacaagcagttccgcgacctcggcgacatcatctacgtg
ggcgacgtggccgagatgaaggccatcgaggaccgccctgacaacggcggcgagctctac
atcggcgccggcgcctcgctggaggcggccttcggcgcgctggtcgagcgcgtgcccagc
ctggccgaggtgtggctgcgcttcgcctcgccgcccatccgccatgccggcaccatgggc
ggcaacgtggccaacggctcgcccatcggcgattcgccgccggtgctgatgtcgctcgat
gcgcagatcgagctgcgccgcggcgacgtggtgcgccgcatgccgctgcccgacttctat
ctggactacatgaagaaccagctgcagccgggcgagttcgtgcaggggctggccgttccg
cacgccgccatgaagcgccaggtgcgcgcctacaagatcagcaagcgcttcgactgcgac
atctccgcgctgtgcgcgggcttcgccatcgaactcgaagccggcggcgacacggtgaag
gccgtgcgcctggccttcggcggcatggccgcgaccgtcaagcgcgccacgaacgccgag
gccgcgctgctcggcaagccgtggacgcaggccagcgtcgccaccgccaagctcgcgctc
gcgcaggatttcaagccgctgtcggacatgcgcgcctcggccgactaccggctgcaggtc
gcccagaacctcattcaacgcctctggctcgaaacccgcgccgaagacgccctgtcgctg
gaagaaaccagcgtctggagcgtgatgccccacgcgacccccgccaccgccgcaggagtc
tga
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