Variovorax sp. PMC12: C4F17_30325
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Entry
C4F17_30325 CDS
T05380
Name
(GenBank) sugar ABC transporter permease
KO
K23535
general nucleoside transport system permease protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_30325
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_30325
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
General nucleoside transporter
C4F17_30325
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Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
AVQ85326
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Position
2:625986..627134
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AA seq
382 aa
AA seq
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MLKLEPRPELSRFWSYASPILALLITVLIGVALFAALGKDPVKGLLVFFYEPIKNGYAIG
ELMVKATPLLIIALGLAVCFRSNVWNIGAEGQFVFGAIAAGGVALLADKTTGQWIVVAIL
AAGILGGMVWAGIVALLRDKCNANEILVSLMLVYVATLLLGYMVFGPWKDPNGYNFPQTK
TFEAVTQIPRLFKGSRVSIGLVIALVGAGALWVFLFRTRAGFAQQVGGLAPAASRYAGFS
ARRAVWIALLTSGGAAGLAGALEVAGPLGQLTPYVPAGYGFAAIIVAFVGRLHPVGMIFS
AILMSMFYIGGELAQSRLGLPKSLTGVFQGLLLFTLLACDTLIAYRIRRKAAAKAASGMT
TASLQASTPITAPVARPNEGAL
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagctcgaaccccgcccggagctgtcgcgcttctggagctatgcctcgccgatc
ctggcgctgctgatcaccgtgctgatcggcgtggcgctgttcgccgcactcggcaaggac
ccggtcaagggcctgctggtgttcttctacgagcccatcaagaacggctacgccatcggc
gagctgatggtcaaggccacgccgctgctcatcatcgcgctggggctggccgtgtgcttc
cgctcgaacgtgtggaacatcggcgccgaagggcagttcgtgttcggcgccatcgcggcg
ggcggcgtcgcgctgctggccgacaagaccaccggacagtggatcgtggtggccatcctg
gccgcgggcatcctcggcggcatggtgtgggcgggcatcgtcgcgttgctgcgcgacaag
tgcaacgccaacgagatcctggtgagcctgatgctggtctacgtggccacgctgctgctg
ggctacatggtcttcggcccgtggaaagacccgaacggctacaactttccgcagaccaag
accttcgaggcggtcacgcagatcccgcgcctgttcaagggctcgcgcgtgagcatcggg
ctggtcatcgcgctggtcggggctggggcgctgtgggtgttcctgttccgcacgcgcgcg
ggctttgcgcagcaggtcggcggtctggcgccggcggcctcgcgctacgcgggcttctcg
gcccgccgcgcggtgtggatcgcgctgctgacctcgggcggcgcggccggcctggccggc
gcgctcgaagtggccggcccgctcgggcagctcacgccgtacgtgccggcgggctacggc
ttcgcggccatcatcgtggccttcgtcgggcggctgcatccggtgggcatgatcttctcg
gccatcctcatgagcatgttctacatcggcggcgaactggcgcagtcgcgcctgggcctg
ccgaagtcgctcaccggcgtgttccagggcctgctgctgttcacgctgctggcctgcgac
acgctcatcgcctaccgcatccgccgcaaggcggccgccaaggccgcctccggcatgacc
accgcctcgctgcaggccagcacacccatcaccgcgcccgtcgcgcgcccgaacgaggga
gccctctga
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