Variovorax sp. PMC12: C4F17_30340
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Entry
C4F17_30340 CDS
T05380
Name
(GenBank) TOMM system kinase/cyclase fusion protein
Organism
vam
Variovorax sp. PMC12
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
AAA_16
Guanylate_cyc
BrxC_BrxD
AAA_22
NACHT
nSTAND3
RNA_helicase
TPR_1
Motif
Other DBs
NCBI-ProteinID:
AVQ85329
UniProt:
A0A2P1VJI5
LinkDB
All DBs
Position
2:629627..633667
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AA seq
1346 aa
AA seq
DB search
MQDAVTNPTQAAASQPAPIPLDIPGYELLEALGAGGYGTVYRARQQSTGAQVAIKVVKLQ
AGNRRVARFHRETRLCAALHHPHIVQLLDKGEQGDCVYGVFEYVPGETLTSLIRRQGALT
ASETGRLMAEVLDALDCAHAAGIVHRDLKPDNVMVTLTGAVPHAKVLDFGIGTVIPQRTG
LQFPALTMTEESLGTPAYSAPEQLRGEPPSIRTDLYAWGLMFLECLTGAPAVQGASAAEI
LHRQLSPQEIPLPPEIVEHPVAALLRKALRKKAAERADSAATLLAELTRLRLEDLVGVLR
STRQAQHETLTRTVATTRVFSEKRQLTVLCCSVSVWPDTDADGAETHDALPSDIEDIELL
QRDELALFAETATRRGGLLAGTLGDRMIVLFGYPHASDTDARQASMTALELMALSRRRAA
AVAQAHGVHLGIRMGMHTGMAVVANGEVPSGHAVNVAMRLEAVAETGTLLASESSHRLLG
RYAHFDKVANVSLPGQSAGIQTYQLNVDRQAPLLPDPSPDAAAQAVCVGREAELERLRAA
WTRARQDHGSAVWIRGEPGIGKSCLADTLRAHVLAEGLRTVGAQCQPENRNNALTPFLNL
LRQRLDAAPDTSPDGRREWLREILRGAGCDEDAVLPIFCAWLSLPLGNCEPSRISPPMQK
ALLLSSMAQWLLHMAESAPLLLVLEDVHWADPTSIEFVEQLSAQLPHRRVLLVLTARPEW
TPPQALEAECIDVRRLEDAQAAELARRALAPRVVTAGVIRNVVERTDGVPLFVQEMARML
LDAYLVESDGVWGFRDTMQPAAIPVTLRDSLVSRFDRLGPLKNLLQLAATIGRQFEIDLL
CACSGRARDAVDADMAVLREAELVMPDDRAGAGAYMFRHALIRDTAYECMLVAQRRQQHR
DVAQTLMQRYPQRVAAEPGGVAQHWADAGDHAQAIVHAVQQLRITQVRSLNDETIAYARH
IDSWMAQLGGTAQREARLDVNSYVTQAMMNKYGWAHEQVVERIALSQDLLDDTVARDKQV
QHLWALITYHHVASNRGEVHRLSHRLLDHATQQQDQGVLVAAQTYLGLSHYSEGRFDLAE
QALSDAIDRYDPVAHAHHAAEFGFDTRVWATTGRALVRWFAGHDEAARNDATTAVRLARE
MSHIPSLSMALLYQSLGHQARGDRARALASTGELLDITARYGLPAFTGYAEIIRCWASGE
ASDIARADGAVEALWGMGCRYCQSYYRAFAAETLAANQRWAEAAERIDECLRLVDVLEER
LYSAELHLKKARYLQAAGADSATVQACFSQAALVARVSGKHRTEAEALVALQALAPAVHD
VAGRLKELAALRPELSVRTPVHAHIT
NT seq
4041 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatgccgtcaccaaccccactcaagcagcagcgtcccaacccgcgccgatcccg
ctggacattcccggctatgaacttctggaggcactgggcgccggcggctacggcacggtg
taccgcgcgcgccagcagagcacgggcgcacaggtcgcgatcaaggtcgtgaagctgcag
gcgggcaaccggcgcgtggcccgcttccatcgcgagacgcggctgtgcgccgcgctgcat
cacccgcacatcgtccagttgctcgacaagggcgagcagggcgattgcgtctacggcgtc
ttcgaatacgtgccgggcgaaacgctcaccagcctcattcgccgccagggcgcgctgacg
gcctccgagaccggccgcctcatggccgaggtgctggacgcactcgactgcgcgcatgcg
gccggcatcgtccaccgcgacctcaagcccgacaacgtgatggtgaccctcaccggcgcc
gtgccgcacgcgaaggtgctcgacttcggcatcggcaccgtcattccccagcgcaccggc
ctgcagttccccgcgctcacgatgacggaggagagcctgggaacgccggcctacagcgcg
cccgagcaactgcgcggcgagccgccgagcatccgcaccgacctctacgcctggggcctg
atgttcctcgaatgcctgaccggcgcacccgccgtgcagggggcgtcggcggcggaaatc
ctgcaccggcaattgagcccgcaggaaattccgctgccccccgagatcgtggagcacccg
gtggcagcgctgctgcgcaaggcgctcaggaagaaggccgcggagcgcgccgattccgct
gccacgctgctggccgaactcacgcgcctgcggctcgaggacctcgtgggcgtgctgcgc
tcgacccggcaggcgcagcatgaaacgctcacgcgcaccgtggccaccacccgcgtgttc
tccgagaagcggcagctcaccgtgctgtgctgcagcgtctcggtgtggcccgacaccgat
gcggacggcgccgagacgcacgacgcgctgccctccgacatcgaggacatcgaactgctg
cagcgcgacgagctcgcgctgttcgcggagaccgccacccgccgcggcggcctgctcgcc
ggcacgctcggcgaccgcatgatcgtgctgttcggctatccgcatgccagcgacaccgac
gcacggcaggccagcatgacggcgttggagctgatggcgctgagccgccgccgcgccgcc
gccgtcgcgcaggcgcacggcgtgcacctgggcatccgcatgggcatgcacaccggcatg
gccgtggtggccaacggcgaagtgccttcaggccatgccgtcaacgtggcgatgcggctc
gaagccgtggccgagacgggcaccctgctcgcgagcgaaagcagccaccgcctgctgggc
cgctacgcgcacttcgacaaggtcgccaacgtgagcctgccgggccagtccgcgggcatc
cagacctaccagctcaatgtcgaccggcaggcgccgctgctgccagacccgtcgccggac
gccgcggcgcaggccgtgtgcgtcggccgcgaggccgaactggagcgcctgcgcgccgca
tggacccgggcgcggcaggaccacggcagcgccgtgtggattcgcggcgagccgggcatc
ggcaagtcctgcctggccgacaccttgcgcgcgcatgtgctggccgaagggctgcgcacc
gtcggcgcgcagtgccagccggagaaccgcaacaacgcgctcacgccattcctgaacctg
ctgcgccagcggctcgacgcggcccccgacacctcgccggacggccgccgcgaatggctg
cgcgagatcctgcgcggcgccggctgcgacgaggacgcggtgctgcccatcttctgcgcg
tggctctcgctgccgctgggcaactgcgagcccagccgcatttctcccccgatgcagaag
gcgctgctgctgtcgtcgatggcgcagtggctgctgcacatggccgagtccgcgccgctg
ctgctcgtgctcgaggacgtgcactgggccgaccccacgagcatcgagttcgtcgaacag
ctcagcgcgcagctgccgcaccgccgcgtgctgctggtgctcacggcgcggcccgaatgg
acgccgccgcaggcgctcgaggccgagtgcatcgacgtgcgccggctcgaggacgcgcag
gccgcggagctggcgcggcgggcactggcgccgcgcgtggtcaccgccggcgtgatccgc
aacgtggtggagcgcaccgatggcgtgccgctgttcgtgcaggaaatggcgcgcatgctg
ctcgacgcctacctggtcgagagtgacggcgtctggggctttcgcgacacgatgcagccg
gccgcgattccggtcacgctgcgcgactcgctggtcagccgcttcgaccggctcggcccg
ctcaagaacctgctgcagctcgcggccaccatcgggcgccagttcgagatcgacctgctg
tgcgcctgctcgggccgcgcgcgcgacgcggtggatgccgacatggccgtgctgcgcgag
gcggagctggtcatgcccgacgaccgcgcgggcgcgggcgcctacatgttccgccacgcg
ttgatccgcgacacggcctacgaatgcatgctggtggcgcagcgccgccagcagcaccgc
gacgtggcgcagacgctgatgcagcgctatccgcagcgcgtggccgccgagcccggcggc
gtggcgcagcactgggccgatgccggcgaccatgcgcaggccatcgtgcatgcggtgcag
caactgcgcatcacccaagtgcgctcgctgaacgatgaaaccatcgcctacgcccggcac
atcgacagctggatggcgcagctcggcggcaccgcccagcgcgaggcccggctcgacgtg
aacagctacgtcacgcaggcgatgatgaacaagtacggctgggcccatgagcaggtggtg
gagcgcatcgcgctgtcgcaggacctgctggacgacaccgtcgcgcgcgacaagcaggtg
cagcacctgtgggccctcatcacctaccaccacgtcgcgagcaaccgcggcgaagtgcac
cgcctgagccaccggctgctcgaccatgcgacgcagcagcaggaccagggcgtgctcgtc
gcggcgcagacctacctcgggctatcgcactattccgaaggtcgcttcgacctggccgaa
caggcgctgagcgatgccatcgatcgctacgaccccgtcgcccacgcgcaccacgcggcc
gagttcggtttcgacacgcgggtgtgggccaccaccgggcgcgcgctggtgcgctggttc
gcgggccacgacgaggccgcgcgcaacgacgcgaccaccgccgtgcgcctggcgcgcgag
atgtcgcacattccttcgctgagcatggcgctgctctaccagagcctgggccaccaggcc
cgcggcgaccgggcccgggcgctcgcgagcaccggcgagctgctcgacatcacggcgcgc
tacggcctgccggcgttcaccggctacgcggaaatcatccgctgctgggccagcggcgag
gcgagcgacatcgcgcgcgccgatggcgccgtggaggcgctgtggggcatgggctgccgc
tattgccagagctattaccgcgccttcgccgcggagacgctggcggccaaccagcgctgg
gccgaggcggccgagcgcatcgacgagtgcctgcgcctggtggacgtgctcgaagagcgg
ctctacagcgccgaactgcacctgaagaaagcccgctacctgcaggccgcgggtgccgac
agcgccaccgtgcaggcgtgtttctcgcaggcggcgctggtcgcgcgcgtgagcgggaaa
caccgaaccgaagccgaagccctggtggcgttgcaggcactggcacccgccgtgcacgac
gttgccggacgcttgaaggagctggccgccctgcggccggaactgtccgtgcgcacgccc
gtgcatgcgcacatcacttga
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