Variovorax sp. PMC12: C4F17_30630
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Entry
C4F17_30630 CDS
T05380
Name
(GenBank) carnitine dehydratase
KO
K01796
alpha-methylacyl-CoA racemase [EC:
5.1.99.4
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00984
Steroid degradation
vam01100
Metabolic pathways
vam01120
Microbial metabolism in diverse environments
vam04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00984 Steroid degradation
C4F17_30630
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
C4F17_30630
Enzymes [BR:
vam01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.99 Acting on other compounds
5.1.99.4 alpha-methylacyl-CoA racemase
C4F17_30630
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Motif
Pfam:
CoA_transf_3
Motif
Other DBs
NCBI-ProteinID:
AVQ85379
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All DBs
Position
2:complement(698334..699416)
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AA seq
360 aa
AA seq
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MSGPLEGLKVVEFAGLGPGPFACMLLSDMGADVVTIDRPGRKLGDRSDITGRGRSVVLAD
LKSPEARAQVLQLVDRADVLVEGFRPGVMERLGLGPDVIAARNPRLVYGRMTGWGQYGPL
AQSAGHDINYIALTGALHAIGALGGAPVPPLNLVGDYGGGSLYLVVGILAALHETKRSGR
GQVVDAAITDGVNSLMSLFASSALRGTFVEQRGRNTLDGGAPYYGTYATADAQHVCIGPI
EPQFFADLCERLGVDPALRDAQNDRARWPALRAELERIFLIRTRDEWTALLEGSDACFAP
VLALGEARAHPHQVARDAFVDVEGVTHPAPAPRFSRTPSNIQGAAPSQAQGLEQVLRRWE
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgagcgggcctctcgaaggcttgaaggtggtcgagttcgcagggctcggacccggtcct
ttcgcttgcatgctgctgagcgacatgggcgccgacgtggtcaccatcgaccggccgggc
cgcaagctcggcgaccgcagcgacatcaccggccggggccgcagcgtggtgctcgccgac
ctgaagagcccggaggcgcgcgcgcaggtgctgcaactcgtggaccgcgcggacgtgctg
gtcgaaggctttcgccccggggtgatggagcgcctgggcctgggacccgacgtgatcgcg
gcacgcaacccgcgcctggtctacggccgcatgaccggctggggccaatacggaccgctg
gcgcagtcggccggccacgacatcaactacatcgcgctgaccggagccctgcacgccatc
ggcgccctgggtggcgcgccggtgccgccgctcaatctggtcggggactacgggggcggc
agcctgtacctggtcgtgggcatcctggcggcgctgcacgagacgaagcgctcgggacgg
gggcaggtggtagatgcggccatcaccgacggagtgaattcgctgatgagcctgttcgcc
agcagcgcactgcgcggaaccttcgtcgagcagcgcggccgcaacacgctggacggcggg
gcaccgtactacggcacctacgcgacggccgacgcgcagcatgtgtgcataggccccatc
gagccccagttctttgcggacctgtgcgaacgcctcggcgtggaccccgccctgcgcgat
gcgcagaacgaccgggcgcgctggcccgcattgcgcgcggagctggagcgcatcttcctg
atccgcacgcgcgacgaatggactgcgttgctggaaggaagcgacgcctgcttcgcgccg
gtgctcgcactcggcgaggcgcgcgctcacccgcatcaggtcgcgcgcgatgcgttcgtc
gatgtggagggtgtgacacaccccgcaccagcgccgcgtttttcgcggacaccatcgaac
attcaaggagcggcgccgtcgcaggcccaaggcctggagcaggtgctgcgccgttgggaa
tga
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