KEGG   Variovorax sp. PMC12: C4F17_30630
Entry
C4F17_30630       CDS       T05380                                 
Name
(GenBank) carnitine dehydratase
  KO
K01796  alpha-methylacyl-CoA racemase [EC:5.1.99.4]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00984  Steroid degradation
vam01100  Metabolic pathways
vam01120  Microbial metabolism in diverse environments
vam04146  Peroxisome
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09111 Xenobiotics biodegradation and metabolism
   00984 Steroid degradation
    C4F17_30630
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    C4F17_30630
Enzymes [BR:vam01000]
 5. Isomerases
  5.1  Racemases and epimerases
   5.1.99  Acting on other compounds
    5.1.99.4  alpha-methylacyl-CoA racemase
     C4F17_30630
SSDB
Motif
Pfam: CoA_transf_3
Other DBs
NCBI-ProteinID: AVQ85379
LinkDB
Position
2:complement(698334..699416)
AA seq 360 aa
MSGPLEGLKVVEFAGLGPGPFACMLLSDMGADVVTIDRPGRKLGDRSDITGRGRSVVLAD
LKSPEARAQVLQLVDRADVLVEGFRPGVMERLGLGPDVIAARNPRLVYGRMTGWGQYGPL
AQSAGHDINYIALTGALHAIGALGGAPVPPLNLVGDYGGGSLYLVVGILAALHETKRSGR
GQVVDAAITDGVNSLMSLFASSALRGTFVEQRGRNTLDGGAPYYGTYATADAQHVCIGPI
EPQFFADLCERLGVDPALRDAQNDRARWPALRAELERIFLIRTRDEWTALLEGSDACFAP
VLALGEARAHPHQVARDAFVDVEGVTHPAPAPRFSRTPSNIQGAAPSQAQGLEQVLRRWE
NT seq 1083 nt   +upstreamnt  +downstreamnt
atgagcgggcctctcgaaggcttgaaggtggtcgagttcgcagggctcggacccggtcct
ttcgcttgcatgctgctgagcgacatgggcgccgacgtggtcaccatcgaccggccgggc
cgcaagctcggcgaccgcagcgacatcaccggccggggccgcagcgtggtgctcgccgac
ctgaagagcccggaggcgcgcgcgcaggtgctgcaactcgtggaccgcgcggacgtgctg
gtcgaaggctttcgccccggggtgatggagcgcctgggcctgggacccgacgtgatcgcg
gcacgcaacccgcgcctggtctacggccgcatgaccggctggggccaatacggaccgctg
gcgcagtcggccggccacgacatcaactacatcgcgctgaccggagccctgcacgccatc
ggcgccctgggtggcgcgccggtgccgccgctcaatctggtcggggactacgggggcggc
agcctgtacctggtcgtgggcatcctggcggcgctgcacgagacgaagcgctcgggacgg
gggcaggtggtagatgcggccatcaccgacggagtgaattcgctgatgagcctgttcgcc
agcagcgcactgcgcggaaccttcgtcgagcagcgcggccgcaacacgctggacggcggg
gcaccgtactacggcacctacgcgacggccgacgcgcagcatgtgtgcataggccccatc
gagccccagttctttgcggacctgtgcgaacgcctcggcgtggaccccgccctgcgcgat
gcgcagaacgaccgggcgcgctggcccgcattgcgcgcggagctggagcgcatcttcctg
atccgcacgcgcgacgaatggactgcgttgctggaaggaagcgacgcctgcttcgcgccg
gtgctcgcactcggcgaggcgcgcgctcacccgcatcaggtcgcgcgcgatgcgttcgtc
gatgtggagggtgtgacacaccccgcaccagcgccgcgtttttcgcggacaccatcgaac
attcaaggagcggcgccgtcgcaggcccaaggcctggagcaggtgctgcgccgttgggaa
tga

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