Variovorax sp. PMC12: C4F17_31190
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Entry
C4F17_31190 CDS
T05380
Name
(GenBank) hypothetical protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_31190
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_31190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
BamE
DUF6491
Palm_thioest
Motif
Other DBs
NCBI-ProteinID:
AVQ85481
LinkDB
All DBs
Position
2:complement(819099..819947)
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AA seq
282 aa
AA seq
DB search
MKNQTSFASLALACVVLALTGCAATGSTVEAANQAQAGSPDKEQVSFPAVDSAWLKGGTF
VDVEQLRRIGRGMTKNQVRELISYPHFSEGLFGPNAWDYVFNLRTGRGDEFATCQYKVVF
KDGVSNAMYWKDPACADYLAPRVTEVVRPAPATATQRFKLAADALFAFDRSGANDILPEG
RRQLDALAEQLKGQYKRFDTVTVIGHTDRLGGDAYNQALSIARAATVRDYLVARGLPQNA
LRSFGVGKTQPVKQCADSLPRSELVACLQPNRRVELEIAGEQ
NT seq
849 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaccaaacctccttcgcttctctcgcgctggcctgcgtcgtgcttgcactcacc
ggttgtgcagccacaggttccaccgtcgaggcggccaatcaggcgcaggccggctcgcct
gacaaagagcaggtcagtttccccgccgtggacagcgcatggctcaagggcggcactttc
gtcgacgtggagcagttgcgtcgcatcggccgtggcatgacgaaaaaccaggtccgcgaa
ctcatcagctatccgcacttctccgaagggctgttcgggccaaacgcgtgggactacgtg
ttcaacctgcgcaccggcaggggcgacgagttcgccacctgccagtacaaggtggtcttc
aaggacggcgtatccaacgcgatgtactggaaggatcctgcctgcgccgactatctggcg
ccccgcgtcaccgaagtggtgcgccccgctcccgcgaccgccacgcagcgcttcaagctc
gcggccgatgccctgttcgccttcgacagatcgggcgccaacgacatcctgcccgaaggc
cgcaggcaactcgacgcgctggcagagcaactgaaaggacaatacaagcgcttcgacacc
gtcactgtcatcggccacacggatcgcctgggcggcgatgcctacaaccaggcgctgtcc
atcgcccgcgcggccacggtgcgtgactacctggtggcgcgcggcttgccgcaaaatgcg
ctgcgttccttcggtgtcggcaagacgcagccggtgaagcagtgtgctgacagcctgccg
cgaagcgagctggttgcgtgcctgcagcccaaccggcgtgtcgaacttgaaattgcaggc
gagcagtag
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