KEGG   Variovorax sp. PMC12: C4F17_31315
Entry
C4F17_31315       CDS       T05380                                 
Name
(GenBank) short-chain dehydrogenase
Organism
vam  Variovorax sp. PMC12
Pathway
vam00061  Fatty acid biosynthesis
vam00780  Biotin metabolism
vam01212  Fatty acid metabolism
vam01240  Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    C4F17_31315
  09108 Metabolism of cofactors and vitamins
   00780 Biotin metabolism
    C4F17_31315
SSDB
Motif
Pfam: adh_short_C2 adh_short Epimerase KR
Other DBs
NCBI-ProteinID: AVQ85505
LinkDB
Position
2:844638..845906
AA seq 422 aa
MAGSRSVLITGAGAGIGRAAALGLARAGWRCVLVDADAAALERTEALWPAGAQRPLGLVA
DLTDAARIERLRLEVPPLDALVNNAGMSAGGAEATSGHDDGGAARLLALNLAAPARVVQA
CAPHLRPGARIVNVASGAGLRAIPWRGLYSPSKAGLIGQGRALAHARPDWTVTTLAPGFV
RTELVQRLIDGGRLDPTQAASKIPMGRMAEPEEMADALCFLASPGARVLTGRLLVLDGGS
SVCGGSQPLPPCERPPLAFDAPLRPSCEAVREPMWRAALDKWVRSHSSHSGSTGYAGVAD
ARALDAPPGSRLDAVLDAARCFRTRHAAHASLTLLMPAPEPGLDWQMAGDADAARMLVAT
LAAEWGSHALRINALELPRDLAPDACLPLLDYMAGPRAQFLTGQVLRLGAAAARDHNKET
PA
NT seq 1269 nt   +upstreamnt  +downstreamnt
atggctggatctcgcagcgtgctgatcaccggcgcaggcgccggcatcggccgcgccgcg
gcgctgggcctggcgcgcgcgggatggcgctgcgtgctggtcgacgccgacgcggccgca
ttggaacgcaccgaagcgctctggccggccggagcccagaggccgctgggcctggtggca
gacctgacggacgcggcccgcatcgaacgcctgcgcctggaggttccgccgctcgatgcg
ctggtcaacaacgcgggcatgtcggccggcggcgccgaggcgacgtccggccatgacgac
ggcggcgcggcgcgcctgctggcgctcaacctggcggcaccggcgcgcgtggtgcaggcg
tgcgccccgcatttgcggccgggggcgcgcatcgtcaacgtggcttccggggcgggcctg
agggccattccctggcgcggcctctacagcccgagcaaggccggattgatcgggcagggc
cgcgcgctggcgcacgccaggcccgactggacggtgaccacgctcgcaccgggtttcgtg
agaaccgaactcgtgcaacgcctgatcgacggtgggcggctggaccccacgcaggcggcg
tcgaagattcccatgggccgcatggccgagcccgaggagatggccgacgccttgtgcttc
ctggccagtccgggcgcgcgtgtgctcaccggccggctgctggtgctcgacggcggctcg
tctgtttgcggaggcagccagccgttgccgccttgcgaacgtccgcccctggcgttcgat
gcgcccttgcgcccgagctgcgaggcggtgcgcgaaccgatgtggcgcgccgccctggac
aaatgggttcgctcgcattcgagccattcgggctccacgggctacgcgggtgttgccgat
gcgcgcgcgctggatgcgccgccgggctctcggctcgatgcggtgctcgatgcggcgcgc
tgcttccgcacgcgccatgcagcgcacgccagcctcacgctgctgatgcctgcgcccgaa
ccggggctcgactggcagatggccggcgatgccgatgcggcacggatgctggtcgccacg
ctggccgccgaatggggctcgcacgcgctgcgcatcaacgcgctggagctgccgcgcgat
ctcgcacccgacgcctgcctgccgctgctcgactacatggccggcccccgggcgcagttc
ctgaccggccaggtgcttcgcctcggcgccgccgcggcccgagatcacaacaaggagact
ccagcatga

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