Variovorax sp. PMC12: C4F17_31410
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Entry
C4F17_31410 CDS
T05380
Name
(GenBank) ABC transporter substrate-binding protein
KO
K11688
TRAP-type transport system periplasmic protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C4F17_31410
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_31410
Transporters [BR:
vam02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
C4F17_31410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DctP
Motif
Other DBs
NCBI-ProteinID:
AVQ85803
LinkDB
All DBs
Position
2:complement(866361..867380)
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AA seq
339 aa
AA seq
DB search
MFFASLLCHAQTAPEQRLRIVGGLGGVTQYTGHEEQFWTRDLATLSGGRYTASIVPFDRA
GVPGQEMLNLMQLGVVPFGTALLSQVSTQYPELGAADMAGLNPDVSTLRRTVGAFRPYLA
AALRERYGAELLAVYIYPAQEVFCNKPLQQLSDLAGRRTRVSSSTQADFIAAVGGTPVYT
EFSQIMANMRSGNTDCAVTGTMSGHTLGLYEVTSTIYTLPLSWGVAVFAANRESFNALPA
DLQALLRKELPKLENAVWTQSERETDEGIACNTGAAGCTKPTKGRMTAVRPSPQDEARRR
EIFANRVLPGWVRRCGPECAKAWNDTLAPVVGLRAPSVQ
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgtttttcgcctcgctgctctgccacgcgcagacggcgcccgagcaacggctgcgcatc
gtcggcggcctgggaggagtcacgcagtacaccggccacgaagagcagttctggacccgg
gatctggccacgctgtcgggcggccgctacaccgccagcatcgtgcccttcgaccgtgcc
ggcgtgccgggacaggagatgctcaacctcatgcagctgggcgtggtgcctttcggcacg
gcgctgctgagccaggtatcgacgcagtatccggagctgggcgccgccgacatggcgggg
ctgaaccccgacgtgtccacgttgcggcgcacggtcggcgcatttcgcccgtacctggcc
gccgcgctgcgcgaacgctatggtgccgaactgctggccgtgtacatctacccggcccag
gaggtgttctgcaacaagccgctgcagcagctgtcggacctggcgggccgacgcacgcgg
gtgtcgagttcgacgcaggcggatttcatcgccgcggtgggcggcacgccggtctacacc
gagttctcgcagatcatggcgaacatgaggtccggcaacaccgactgcgcggtcaccggc
accatgtcgggccacacgctgggcctgtacgaggtgaccagcaccatctacaccttgccg
ctgagctggggcgtcgcggtgttcgcggccaaccgcgagagtttcaacgcgctgccggcc
gatcttcaggcattgctgcgcaaggaactgcccaagctcgaaaacgcggtatggacccag
tcggagcgggaaaccgacgagggcatcgcctgcaacaccggtgcggcgggttgcaccaag
cccaccaagggccgcatgacggccgtccggccgtcgccgcaggacgaagcgcgccgccgt
gagatcttcgcgaaccgcgtgctgcccggttgggtgcggcgttgcggcccggagtgcgcc
aaggcctggaacgacacgctggcgccggtggtggggctgcgcgctccttcagttcagtga
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