Variovorax sp. PMC12: C4F17_31495
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Entry
C4F17_31495 CDS
T05380
Name
(GenBank) DUF2341 domain-containing protein
KO
K03561
biopolymer transport protein ExbB
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_31495
Transporters [BR:
vam02000
]
Other transporters
Pores ion channels [TC:
1
]
C4F17_31495
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MotA_ExbB
DUF2341
Laminin_G_3
Laminin_G_2
DUF2721
Pmp3
Laminin_G_1
3keto-disac_hyd
Motif
Other DBs
NCBI-ProteinID:
AVQ85533
LinkDB
All DBs
Position
2:complement(882900..884705)
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AA seq
601 aa
AA seq
DB search
MRRILFIVLTLLSTLLPGMAHAWWQAEWSYRKPVTVDGGPQAGAIGSDAGRVPVLVRLHT
GNFKFEGVSETGADLRFVAADDKTVLNHQIEQFDPLLGMALIWVDVPNVSAGTPQKLWMY
YGNPKAPASGNGQRSFDPDYTLVYHFAEGAVPPRDTTAYGNNGQTPAVPVEGTVIGKGAQ
LGTGALMLPATPSLAVQAGGTLTFSAWVKPDQLGARQAIYARRDGAGELVIGIDQGVPFV
QVNGQRSTPGQPIQAGQWSHLAVKAEGESVALYVGGRPTVSLAGKLPALNTAAALGADAP
AATPGASAAPGAQPAAAFAPFTGAIDEVRLSKVARADALLLADAVSQGAESRLTVFGADE
QQAGKSHFGFILAAMPLDAWIVVGLLGLMMVVSWAIMIAKGRHYGATSRANEAFIEHFRE
AAGAPLDRLATSNTVPQDVRADSSLWRLYEVAIGEMRRRHDRGYDLSAVSAATIGAIRAA
MDGVMVREIERMSKRMNWLSTTIEGAPYVGLFGTVIGIMLVFVVAAMAGAVDINSVAPGM
AAALLCTAAGLGVAIPALFGYNWLASRSDAITADMAVFVDEFVTRLAEEQGEGRSLPSAR
A
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgaattcttttcatcgtgctcacgctgctgagcacgctcttgcccggcatggcc
cacgcctggtggcaagccgagtggtcctaccgcaagcccgtcaccgtcgacggcggcccg
caggccggtgccatcggcagcgatgccgggcgcgtgccggtgctggtgcgccttcacacg
ggaaacttcaagttcgaaggcgtgagcgagaccggcgccgacctgcgcttcgtcgcggcc
gacgacaagaccgtgctgaaccaccagatcgagcagttcgatccgctgctgggcatggcg
ctgatctgggtcgacgtgcccaacgtgtcggctggcacgccgcagaagctgtggatgtac
tacggcaacccgaaggcgcccgcgtccggcaacggccagcgcagcttcgaccccgactac
acgctggtctatcacttcgccgaaggcgcggtgcccccgcgcgacaccacggcctacggc
aacaacggccagacgccggccgtgccggtcgaaggcaccgtcatcggcaagggtgctcag
ctcggcaccggtgcgctgatgctgcccgccacgccgtcgctcgccgtgcaggccggcggc
acgctgaccttctcggcctgggtgaagcccgaccagctcggcgcgcgccaggcgatctat
gcgcgccgcgacggtgccggcgaactggtgatcggcatcgaccagggcgtgcccttcgtg
caggtcaacggccagcgcagcacgcccggtcagccgatccaggccggccagtggtcgcac
ctggcggtgaaggccgagggtgagagcgtggcgctgtatgtgggcggacgtcccacggtg
tcgctggcgggcaagctgccggcgttgaacacggcggcggcgctcggcgccgatgcgccg
gccgccacacccggcgcatcggccgcaccgggcgcacagcctgccgcagccttcgcaccg
ttcaccggcgccatcgacgaagtgcgcctgtccaaggtggcgcgcgccgatgcgctgctg
ctggccgatgccgtctcgcagggcgcggagtcgcgcctcacggtgttcggtgccgacgag
cagcaggccggcaagagccacttcggcttcatcctggccgcgatgccgctggacgcgtgg
atcgtggtgggcctgctgggcctgatgatggtcgtctcgtgggccatcatgattgcgaag
ggccgccactatggcgccacctcgcgcgccaacgaagccttcatcgagcatttccgcgaa
gccgccggtgcaccgctggaccgcctggccacgagcaacacggtgccgcaagacgtgcgt
gccgattcgtcgctctggcgcctctatgaggtggccatcggcgagatgcgccgccgccat
gaccgcggctatgacctgagcgccgtgtcggctgccaccatcggtgccatccgcgcggcc
atggacggcgtgatggtgcgcgagatcgagcgcatgtccaagcgcatgaactggctctcg
accaccatcgaaggcgcgccttatgtgggcttgttcggcacggtgatcgggatcatgctg
gtgttcgtcgtggcggccatggccggcgcggtggacatcaactcggtggccccgggcatg
gcggccgcgctgctgtgtaccgccgccggcctgggcgtcgcgattcccgcgctgttcggc
tacaactggctcgcctcgcgctcggacgccatcacggccgacatggccgtgttcgtcgat
gagttcgtcacgcgcctggccgaagagcagggcgaaggccgctcgctgccgtcggcccgg
gcctga
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