Variovorax sp. PMC12: C4F17_31630
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Entry
C4F17_31630 CDS
T05380
Name
(GenBank) ABC transporter ATP-binding protein
KO
K01995
branched-chain amino acid transport system ATP-binding protein
Organism
vam
Variovorax sp. PMC12
Pathway
vam02010
ABC transporters
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
C4F17_31630
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_31630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vam02000
]
C4F17_31630
Transporters [BR:
vam02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
C4F17_31630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
BCA_ABC_TP_C
AAA_21
AAA_25
SMC_N
AAA_30
AAA_23
AAA_29
AAA_16
AAA_15
AAA_27
RsgA_GTPase
ABC_ATPase
AAA_22
AAA_19
SRP54
Rad17
Motif
Other DBs
NCBI-ProteinID:
AVQ85557
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Position
2:925188..926039
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AA seq
283 aa
AA seq
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MRALIEGTPVATRTRLVPGTAPLLRLSDVRMSFGGIVAVQDVGFDVMPGTVHALIGPNGA
GKTTMLNCISRFYTPQKGTMRLRTPTGEHDLLKCKAHQISRLGIARTFQNLELFSELTVF
DNVLIARSGAMRCTLAEALLRLPRQRREEREQRERTQQIIDSLALGAHAHTLVRDLPYGT
QKLVELARAMALEPVLMLLDEPAAGMNNREIDALGDTLRRLQQATGATLLLIEHSMPLVM
SISDTITVMHNGAFLAQGSPREIEQNPAVVEAYLGGGKSGKRR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagggcactgatcgaaggcacgcccgtcgcgacccggacccggcttgtccccggcacc
gcgcccctgctgcgcctgtccgacgtgcgcatgagcttcggcggcatcgtcgccgtgcag
gatgtcggcttcgacgtgatgcccggcaccgtgcatgcgctgatcggcccgaacggcgcc
ggcaagaccacgatgctcaactgcatcagccgcttctacaccccgcagaagggcacgatg
cgcctgcgcacgcccaccggcgaacacgacctgctcaagtgcaaggcacaccagatctcg
cgcctgggcatcgcgcgcaccttccagaacctggagctgttctcggaactcacggtgttc
gacaacgtgctcatcgcgcgctcgggcgccatgcgctgcacgctggctgaggcgctgctg
cggctgccgcgccagcgccgcgaggagcgcgagcaacgcgaacgcacgcagcagatcatc
gacagcctggcattgggcgctcacgcccacacgctggtgcgcgacctgccctacggcacg
cagaagctggtggagctggcacgcgccatggcgctggagccggtgctgatgctgctcgac
gaaccggccgccggcatgaacaaccgcgagatcgatgcgctgggcgacacgctgcgccgg
ctgcagcaggccacgggcgcgacgctgctgctcatcgagcacagcatgccgctggtgatg
tcgatctccgacaccatcaccgtgatgcacaacggcgccttcctggcgcagggctcgccg
cgcgagatcgagcagaacccggccgtggtcgaggcctatctcggaggaggcaagagtggc
aagcgccgttga
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