Variovorax sp. PMC12: C4F17_31920
Help
Entry
C4F17_31920 CDS
T05380
Name
(GenBank) multidrug ABC transporter ATP-binding protein
KO
K13926
ribosome-dependent ATPase
Organism
vam
Variovorax sp. PMC12
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99974 Translation
C4F17_31920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
ABC2_membrane
ABC2_membrane_2
RsgA_GTPase
ABC2_membrane_4
AAA_23
nSTAND1
HUTI_composite_bact
MMR_HSR1
PhoH
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AVQ85611
LinkDB
All DBs
Position
2:complement(991953..994763)
Genome browser
AA seq
936 aa
AA seq
DB search
MARRAGTEGAVTAPADRGVAPTPREVARLAHVVLRRGRTTALDDISLGIAAERMVGLIGP
DGVGKSSLLALLAGAQALGQGRVEVLGGDMADARHRRGVCPRIAYMPQGLGRNLYPTLSI
EENLQFFGRLFGHGPSERRQRIDALAGTMGLSQFLERPVGQLSGGMKQKLGLCCALIHEP
DLLILDEPTTGVDPLSRGQFWALIDAIRRQRDAAGRPLSVIVATAYMEEADAFDWLVAMD
AGAVLATGTPAELRARTGAASLEQAFIRLLPEGKRGDARELVVPALPATAGDDVAIEAKG
LSMRFGDFVAVDRVDFRIRRGEIFGFLGSNGCGKTTTMKMLTGLLPVSAGEARLFGRKVS
ADDLDARRRVGYMSQSFSLYGELTVRQNIVLHARLFRLPEADVPARVAELAARFGLEDAL
GRLPDSLPLGMRQRLSLAVAMVHRPEMLILDEPTSGVDPVARDMFWRLMIDLARKDGVTI
FISTHFMNEAARCDRISLMHAGRVLVTDSPAAIVQRSGKATLEQAFVAQLQQAVGAGEPV
AAAPAPSPASKADRPSHAAGTRWFSVARAWSFTRREALELRRDPVRATLALLGTVILMFI
IGYGISLDVENLSYAVLDRDQSELSRNYALDLSGSRYFVEKPPITDYAQLDQRMRSGELA
LAIEIPPGFSRDVQRGTPAQIGAWIDGAMPARAETVRGYVQAMHQTWLSGVAERRLGTRA
RAPSTIEIRFRYNPDVRSLPAMVPAVIPLLLMMIPSMLAALSVVREKELGSIVNLYVTPV
TRAEFLLGKQLPYIGLGVLNFLTMSALAVTVFGVPIKGSFFTLALGALVFTTFSTGFGLL
CSTFTRTQIAAIFVTLIGTIVPCVKFAGLLDPVSSLEGIGAFVGRIYPAAHFLTISRGVF
GKALSLPDLVPQFLAMLAAVPVILGLSIALLKKQQS
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
ctggcccgacgggctggcactgaaggtgccgtgaccgcgccggccgacaggggcgttgcg
ccgacgccgcgcgaggtcgcccgcctcgcgcacgtggtgctccggcgcgggcgcacgacg
gccctcgacgacatcagcctcggcattgcggccgaacggatggtcgggctcatcgggccc
gacggcgtgggcaagtcgagcttgctggcgttgctggccggcgcgcaggcgctcgggcag
ggccgcgtggaggtgctgggtggcgacatggccgatgcccggcaccgccgcggcgtctgc
ccgcgcatcgcgtacatgccccaggggctgggcaggaacctctatccgacgttgtcgata
gaagagaacctgcagttcttcgggcgcctgttcggtcacgggccgagcgagcggcgccag
cgtatcgatgcgctggccggcaccatgggcctgagccaattcctggagcgtccggtggga
cagctgtcgggcggcatgaagcagaagcttggcctgtgctgcgcgttgatccacgagccc
gacctgctgatcctcgacgaaccgacgaccggtgtggacccgttgtcgcgcggacagttc
tgggccctcatcgacgccatccggcgtcaacgcgacgccgcgggccggcccctgagcgtg
atcgtcgcgaccgcgtacatggaggaggccgatgccttcgactggctggttgccatggat
gccggcgcggtgctcgccaccgggacgcccgccgagttgcgcgcccgcaccggcgcggca
tccctcgagcaggccttcatcaggctgctgcccgagggcaagcgcggcgatgcccgcgaa
ctggtggtgcccgcgttgcctgccacggccggcgacgacgtcgccatcgaggcgaagggc
ctctcgatgcgctttggcgacttcgtggcggtggaccgcgtcgacttccggattcgtcgc
ggagaaatcttcggcttcctcggctcgaatggctgcggcaagacgaccacgatgaagatg
ctgaccgggctgctgcccgttagcgcgggcgaggcacggctgttcgggcgaaaggtctcg
gccgacgacctcgacgcgcggcgccgcgtgggctacatgtctcaatcgttctcgctctac
ggcgagctcacggtgcggcagaacatcgtgctgcacgcacgcctgttccggttgccggag
gcggacgtgcctgcacgcgtggcggagttggccgcgcgcttcgggctggaggacgcgctc
ggccgcctgcctgacagcctgcccctgggcatgcgccagcggctgtcgctggccgtggcg
atggtgcatcgcccggaaatgctgatcctggacgagccgacctccggcgtcgacccggtg
gcgcgcgacatgttctggcgcctcatgatcgacctggcgcgcaaggacggggtcaccatc
ttcatatcgacccacttcatgaacgaggccgcgcgctgcgaccgcatttcgctgatgcac
gccggccgcgtgctggtgacggacagcccggcggccatcgtgcagcgcagcggcaaagcc
acgctggaacaggccttcgtcgcgcaactgcagcaggccgtgggcgctggcgagcccgtt
gccgccgcacccgcgccgagcccggcgagcaaggcggaccgtccgagccacgcggctggc
acgcgctggttcagcgtcgcgcgcgcctggagcttcacgcggcgcgaggcgctggagctg
cgccgcgacccggtgcgcgccacgctggcgctcctgggcacggtgatcctcatgttcatc
atcggctacggcatcagcctggacgtcgaaaacctcagctatgcggtgctcgaccgcgac
cagagcgagctcagccgcaactacgcgctcgacctgtccggatcgcgctacttcgtggag
aagccacccatcaccgactacgcgcagctcgaccagcgcatgcgcagcggcgagctggcg
ctggccatcgagattccgccgggcttctcgcgggacgtgcagcgcggcaccccggcgcag
atcggtgcgtggatcgacggcgccatgcccgcgcgcgcggaaaccgtgcgcggctacgtg
caggccatgcaccagacatggttgagcggcgtcgccgagcgccggctcggcacgcgggcg
cgcgcgccgagcaccatcgagatccgctttcgctacaaccccgacgtccgcagcctgccg
gcgatggtgccggccgtcatccctctgctgctgatgatgatcccgtcgatgctcgccgcg
ctttccgtcgtgcgcgagaaggagctgggctcgatcgtcaatctctacgtcacgccggtc
acgcgcgccgagttcctgctgggcaagcagctgccctacatcgggctgggggtgctcaat
ttcctgacgatgtccgcactcgcggtgacggtcttcggcgtgccgatcaagggcagcttc
ttcacgctcgcgctcggcgcgctcgtgttcacgacgttctccacgggcttcggcctgctg
tgctccacgttcacgcgaacgcagatcgccgcgatcttcgtgacgctgatcggcaccatc
gtcccgtgcgtcaagttcgccgggctgctcgatccggtctcttcgctggagggcatcggg
gcgttcgtcggccggatctatccggcggcgcactttctcacgatcagccgcggtgtcttc
ggcaaggcgctgtcgctgcccgacctcgtgccccagtttctggcgatgctggcggccgtg
ccggtcattctcggcctgtcgatcgcgctgctgaagaagcagcagagctag
DBGET
integrated database retrieval system
