KEGG   Variovorax sp. PMC12: C4F17_32010
Entry
C4F17_32010       CDS       T05380                                 
Name
(GenBank) adenosylcobalamin-dependent ribonucleoside-diphosphate reductase
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
vam  Variovorax sp. PMC12
Pathway
vam00230  Purine metabolism
vam00240  Pyrimidine metabolism
vam01100  Metabolic pathways
vam01232  Nucleotide metabolism
Module
vam_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
vam_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:vam00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    C4F17_32010
   00240 Pyrimidine metabolism
    C4F17_32010
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vam03400]
    C4F17_32010
Enzymes [BR:vam01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     C4F17_32010
DNA repair and recombination proteins [BR:vam03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    C4F17_32010
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: AVQ85625
LinkDB
Position
2:complement(1008900..1010741)
AA seq 613 aa
MHMASAIVDDPSFPALPMQPISRDVLMEKYARASERCIEDIQHRVAQALAQAEKPWDREV
WASRFLRAMQDGFVPAGRIQSAAGTTLAATLINCFVQPVGDSITAEDEGHPGIYIALAEA
AETMRRGGGVGYDFSRIRPRGAWVAATQSSASGPVSFMRVFDRSCETVESAGARRGAQMG
VLRCDHPDIEDFIGAKDHGELTNFNLSVGLTDAFMQAVSDDATIELVHRAEPGPRIRCSL
HHRRGDGMWVYGTRPARALWERIMRSAYTHAEPGAMFLDRINAENNLSYCETLSATNPCG
EQPLPPYGGCCLGSIDLTRFVKDPFEPEARFDEEGFSHLAGIAVRMLDNVLDITAWPLER
QRQEALGKRRVGLGFMGLGDALVMLNLRYDAPEGRDAARRIARAMRDAAYGASCALAVER
GAFPLFDADRYLGGHTFASRLPEPMKARIRAHGVRNSHLLSIAPTGTISLAFSDNASNGI
EPAYGWAFARRRRLPAGGVEEYAVEDHALRLFRQRKGMDAALGPAFVTALQMSTLAHVEM
VAAVAPYIDAAISKTVNVPAGCAYEDFKDLYMQAWRLGLKGLATYRPNPLLGAVMEAHPR
PACGGCATPVAQA
NT seq 1842 nt   +upstreamnt  +downstreamnt
atgcacatggcgagcgctatcgtcgacgacccgtcctttcccgcactgccgatgcaaccg
atcagccgcgacgtgctgatggagaaatacgcccgcgcaagcgagcggtgcatcgaagac
attcaacaccgcgtggcgcaagccctggcacaggccgaaaagccctgggaccgcgaagtc
tgggcctctcgcttcctgcgcgcgatgcaggatggattcgtacccgcggggcgcatccag
tcggccgccggcacgacgctggcggccaccctgatcaactgcttcgtgcagcccgtcggc
gattcgatcaccgctgaggacgagggacacccgggcatctacatcgcactggcagaagcg
gccgagaccatgcgccggggcggcggcgtcggctacgacttctcgcgcatccgcccgcgc
ggggcctgggtggccgcaacgcaatccagcgcgtcggggccggtctcgttcatgcgcgtc
ttcgaccgttcgtgcgagaccgtggagtccgccggcgcgcggcgaggcgcccagatgggc
gtgctgcgctgcgaccatcccgacatcgaggatttcatcggtgcgaaggatcacggcgag
ctgaccaacttcaacctgtcggtggggctgaccgatgccttcatgcaggccgtgagcgac
gacgcgaccatcgaactggtgcaccgggccgaacccgggcctcgcatccgctgcagcctc
catcatcggcgtggcgatggaatgtgggtgtacggcacgcggcccgctcgagccttgtgg
gagcggatcatgcgatcggcctacacgcatgccgagcccggcgccatgttcctggaccgc
atcaatgccgagaacaacctctcctattgcgagacgctctcggccaccaatccttgcggc
gagcagcccttgccaccctacgggggatgctgcctcggatcgatcgacctgacgcgcttc
gtcaaagacccgttcgagcctgaggcgcgcttcgacgaagaaggcttttcgcaccttgcc
ggcatcgccgtgcgcatgctcgacaacgtgctggacatcactgcctggccactggagcgc
cagcgacaggaggcgctcggcaaacggcgcgtcggcctcggtttcatggggctgggcgat
gcgctggtgatgctcaacctgcgctacgacgccccggaaggccgcgacgccgcgaggcgc
atcgcccgggccatgcgggatgcggcctacggcgcgtcgtgcgcactcgccgtggagcgc
ggtgccttcccgctgttcgacgccgatcgctacctgggcggccacaccttcgcgtcccgg
ctcccggagcccatgaaggcgcggatccgtgcgcacggcgtgcgcaactcgcacctgttg
tcgatcgcgccgaccggcaccatcagcctcgcgttctcggacaatgcgagcaacggcatc
gagccggcctacggctgggccttcgcgcggcgcaggcggctgcccgcgggcggggtcgaa
gagtacgcggtagaggaccatgcgctgcgcctgtttcgccagcgcaagggcatggatgcg
gcgctcgggccggccttcgtcaccgcattgcagatgagcacgctggcgcatgtggagatg
gtggcggccgtggcgccttacatcgacgcggccatctcgaagaccgtcaacgtccctgcc
ggctgtgcatacgaggatttcaaggacctgtacatgcaggcctggcgactagggctcaag
ggcctggcgacctaccggccgaacccgttgctgggcgcggtgatggaggcccacccgcgc
ccggcatgcggggggtgtgcgacgccggtcgcacaggcctga

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