Variovorax sp. PMC12: C4F17_32555
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Entry
C4F17_32555 CDS
T05380
Name
(GenBank) aldehyde dehydrogenase family protein
KO
K00128
aldehyde dehydrogenase (NAD+) [EC:
1.2.1.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00010
Glycolysis / Gluconeogenesis
vam00053
Ascorbate and aldarate metabolism
vam00071
Fatty acid degradation
vam00280
Valine, leucine and isoleucine degradation
vam00310
Lysine degradation
vam00330
Arginine and proline metabolism
vam00340
Histidine metabolism
vam00380
Tryptophan metabolism
vam00410
beta-Alanine metabolism
vam00561
Glycerolipid metabolism
vam00620
Pyruvate metabolism
vam00625
Chloroalkane and chloroalkene degradation
vam00770
Pantothenate and CoA biosynthesis
vam00903
Limonene degradation
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam01120
Microbial metabolism in diverse environments
vam01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
C4F17_32555
00053 Ascorbate and aldarate metabolism
C4F17_32555
00620 Pyruvate metabolism
C4F17_32555
09103 Lipid metabolism
00071 Fatty acid degradation
C4F17_32555
00561 Glycerolipid metabolism
C4F17_32555
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
C4F17_32555
00310 Lysine degradation
C4F17_32555
00330 Arginine and proline metabolism
C4F17_32555
00340 Histidine metabolism
C4F17_32555
00380 Tryptophan metabolism
C4F17_32555
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
C4F17_32555
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
C4F17_32555
09109 Metabolism of terpenoids and polyketides
00903 Limonene degradation
C4F17_32555
09111 Xenobiotics biodegradation and metabolism
00625 Chloroalkane and chloroalkene degradation
C4F17_32555
Enzymes [BR:
vam01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.3 aldehyde dehydrogenase (NAD+)
C4F17_32555
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Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AVQ85720
LinkDB
All DBs
Position
2:complement(1118110..1119546)
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AA seq
478 aa
AA seq
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MHRIERIYIDGEFVAPHGQEWFDLHNPSTEEVIGRVLLGNAHDARRAIAAAKAAFPAWSR
TTREERVAALKRMHRAVVAREDRLMEAILEEYGAPSVRGRWMATYPAAVIEQAVEVLESF
AFEEQAGTARVIQTPVGVAGLITPWNSNAGFICNKLATALAAGCTVVIKPSEMSALQTQV
IAEALHDAGLPPGVFNIVNGRGDVVGEEIARHPDIAKISFTGSSAVGEHLVTAGAATMKR
VTLELGGKSPTVVLEDADFAGVMPLVLQAGFANSGQACIAGTRILVPRARLAEFEQIARE
AVSHIKSGDPSKADTDIGPMVSAKQWERVQSYIRLGQAEGAKLLAGGEGRPEGLHRGWFV
KPTIFTGATNQMRIAREEIFGPVLTVIPYEDEADAIAIANDTRYGLSALVLGKDSARCER
VARQIDAGRVLVNTLSHEPRAPFGGFKHSGLGREMGRWGVNAYLEPKTLLMDAGVSRR
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgcattgaacgcatctacatcgacggcgaattcgtcgcaccgcacggccaggaa
tggttcgatcttcacaatccgagcaccgaggaagtcatcggccgggtgctgcttggcaat
gcgcacgatgcaaggcgcgcaatcgcggctgccaaggccgcgttccccgcctggtcgcgc
accacgcgcgaggaacgcgtggcggcgctcaagcgcatgcaccgggccgtcgtcgcacgc
gaagaccggttgatggaagccatcctggaggaatacggcgcgccttcggtgcgcgggcgc
tggatggcgacctatccggccgccgtcatcgagcaggccgtcgaagtgctggaatccttc
gcgttcgaggagcaggcgggaactgcgcgggtgatccagacgcccgtgggcgtcgctggc
ctgatcactccctggaacagcaatgcgggcttcatctgcaacaagctcgccacggcgctt
gcggcaggctgcaccgtcgtcatcaagcccagcgagatgagcgcgctgcaaacgcaggtc
attgccgaggcgctgcatgacgccggcctgcctcccggcgtgttcaacatcgtcaatggc
cgtggcgatgtcgtcggcgaggaaatcgcacgccatcccgacattgccaagatatcgttc
accggatcgtccgccgtcggcgagcatttagtgaccgccggtgcggccacgatgaagcgc
gtgacgctggaattgggcggcaagtcgcccacggtggtgctggaggacgccgacttcgcg
ggcgtcatgcctctcgtgctccaggcaggcttcgccaacagcggacaagcctgcatcgcg
gggacgcgcattctcgtgccgcgggcgcggctggccgagttcgagcagatcgcaagggaa
gcggtgtcgcacatcaagtcgggcgacccgagcaaagccgacaccgacatcggccccatg
gtgagcgcaaagcaatgggagcgcgtgcagagctacatccgccttggccaagccgaaggc
gcgaagctgctcgccggcggtgaagggcggcccgagggactgcacagaggctggttcgtg
aagccgacgatcttcaccggcgcaaccaaccagatgcgcattgcacgcgaggaaatcttc
ggccccgtgctgaccgtgatcccctatgaagacgaggccgacgccattgccatcgccaac
gacacgcgctacggactgagcgccctcgtcctcggcaaggactccgcgcgctgcgaacgg
gtggcgcggcagatcgatgcgggccgggtcctcgtcaacacgctgtcccatgagccgcgc
gcgccgttcggcggcttcaagcactcggggctcgggcgcgagatggggcgatggggagtg
aacgcctatctggagcccaagacgctgctgatggacgcgggggtatcccggcgttga
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