Variovorax sp. PMC12: C4F17_32630
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Entry
C4F17_32630 CDS
T05380
Name
(GenBank) phospholipase C, phosphocholine-specific
KO
K01114
phospholipase C [EC:
3.1.4.3
]
Organism
vam
Variovorax sp. PMC12
Pathway
vam00562
Inositol phosphate metabolism
vam00564
Glycerophospholipid metabolism
vam00565
Ether lipid metabolism
vam01100
Metabolic pathways
vam01110
Biosynthesis of secondary metabolites
vam02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vam00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
C4F17_32630
09103 Lipid metabolism
00564 Glycerophospholipid metabolism
C4F17_32630
00565 Ether lipid metabolism
C4F17_32630
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
C4F17_32630
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
vam02042
]
C4F17_32630
Enzymes [BR:
vam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.3 phospholipase C
C4F17_32630
Bacterial toxins [BR:
vam02042
]
Type II toxins: Membrane damaging toxins
Toxins that enzymatically damage the membrane
C4F17_32630
SSDB
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GFIT
Motif
Pfam:
Phosphoesterase
PLipase_C_C
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AVQ85735
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All DBs
Position
2:complement(1134397..1136547)
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AA seq
716 aa
AA seq
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MTPFNRRTFLRAAAASAALGPFPPAIQRALAIPANNATGTINDVEHVIILMQENRSFDHY
YGTMPGVRGFSDRFTIPMATGKPVWIQQGTADAVQPFYLDATKGNALRVGGAHDWGDQQS
AWDGGRMAAWPKAKNTKISMGYLQQSDLPFHWALANAFTICDAYHTSIHTGTFTNRMFLW
SGTNGANVAGQACVTNANWGGLGPSTDGLTWTTYPERLQAAGVSWKVYNRPGNNSNNNQL
VAFASYRAVDEQLRAQGSPNVAYSPALEAQSPLYKGFGNTMPDGGYLQAVADDIAAGTLP
QVSWIVAPGAYSEHPSMSVPQQGAWYIQTLLDMLTANPDVWSKTVLIVNFDENDCFFDHM
PPPAPPWRNTDGTYQGKSTVDIGKEYYTMPAPPGDSSQRTPDGKPFGAGVRLPMLVISPW
SVGGWVNSQVFDHTSTLRFLEQRFGVRETNISPWRRTVFGDLMSCFDFRNPNAAKPALVT
APTKAQADATYTQQVASPGVPVPAVGSVPLPSQARAARPSRALPYHLHTSANVDLANGQA
WLTFSNTGTQGAVFHVYDELNLSRYPRRYTVEAGKMISDAWAAVADNAGKYSLWVLGPNG
YHRHFKGDLSTLSSGPNPEVRVCYDHDGNEIRLTIMNMGNAPAAVTVSSNAYRTDGPWTY
TVAPGMQMEPSWKLAGTNSWYDFTLTMGDSFERRFAGRLETGKDGVSDPAMGVAAV
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgacgccattcaatcgccgcaccttcctgcgcgccgccgcggccagcgccgcactcggt
ccgttcccgcccgccatccagcgcgcactggccattccggccaacaacgcgacgggcacc
atcaacgacgtggagcacgtcatcatcctgatgcaggagaaccgctccttcgaccactac
tacggcaccatgcccggcgttcgcggcttcagcgaccgcttcaccatcccgatggctacg
ggcaagccagtgtggatccagcagggcacggccgacgcggtgcagccgttctatctcgac
gccaccaaaggcaatgcgctgcgcgtcggcggcgcgcacgactggggcgatcagcaatcg
gcatgggacggcggacgcatggcggcgtggcctaaagccaagaacaccaagatctcgatg
ggctatctgcagcagtccgacctgccgttccattgggcgctcgccaacgcattcacgatc
tgcgacgcgtaccacacctcgatccacacgggcaccttcaccaaccgcatgttcctgtgg
agcggcaccaacggcgcgaacgtcgcgggccaggcctgcgtcaccaacgccaactggggc
ggcctggggccctcgacagacggcctgacatggacgacctacccggagcggctgcaagcg
gccggcgtgagctggaaggtctacaacaggcctggcaacaacagcaacaacaaccagctg
gtcgcattcgcctcctaccgcgccgtcgatgagcaactgcgcgcgcagggttcgccgaac
gtggcgtactcaccggcgctcgaggcgcagtcgccgctgtacaaaggcttcggcaacacc
atgccggacggcggctacctgcaggccgtggccgacgacatcgccgcgggtacgctgccg
caggtcagctggatcgtcgcgccgggtgcctacagcgagcatccgagcatgtcggtcccg
cagcagggcgcctggtacatccagacgctgctggacatgctcaccgcgaatccggatgtc
tggagcaagaccgtgctcatcgtcaacttcgacgagaacgactgcttcttcgaccacatg
ccgccgccggcaccgccctggcgcaatacggacggcacctatcagggcaagtcgacggtc
gacatcggcaaggagtactacacgatgccggcgccgcccggcgattcgagccagcgcacg
cccgacggcaagcccttcggcgccggtgtacggctgccgatgctcgtgatctcgccgtgg
agcgtgggcggctgggtcaactcacaggtgttcgaccacacctcgacgctgcgcttcctg
gagcagcgcttcggcgtgcgcgagaccaacatcagcccgtggcgccgcaccgtgttcggg
gacctgatgtcgtgcttcgacttccgcaatccgaacgcggccaagcccgcgctggtgacg
gcgccgaccaaggcgcaggcggacgccacgtacacgcagcaggtggcgtcgcccggcgtg
cccgttcccgccgtgggctcggtgccgctgccttcgcaggcacgcgccgcgcggccctcg
cgcgcattgccgtatcacctgcatacgagcgccaacgtcgacctggccaacggacaggca
tggctcacgttcagcaacacgggcacgcagggtgcggtgttccatgtctacgacgagctg
aacctctcgcgctatccccgccggtacacggtggaagcgggaaagatgatctccgatgca
tgggcggctgtggcggacaacgcgggcaagtacagcctctgggtgctcgggccgaacggc
taccaccggcatttcaagggcgacctgagcaccctgtcgagcggaccgaatccggaggtg
cgtgtgtgctacgaccatgacggcaacgagatccgcctgacgatcatgaacatgggcaac
gcgccggcggccgtgacggtgagctccaacgcctaccgcaccgacgggccgtggacctac
accgtggcgcccggcatgcagatggagccatcgtggaagctcgcgggcaccaacagctgg
tacgacttcacgctgaccatgggcgacagcttcgagcggcgtttcgctggacgcctggag
accggcaaggacggcgtgagcgatccggccatgggcgtcgccgccgtatag
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