Vibrio anguillarum 775: VAA_00351
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Entry
VAA_00351 CDS
T01536
Name
(GenBank) DNA-directed RNA polymerase beta chain
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
van
Vibrio anguillarum 775
Pathway
van03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
VAA_00351
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
van03021
]
VAA_00351
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_00351
Enzymes [BR:
van01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
VAA_00351
Transcription machinery [BR:
van03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
VAA_00351
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
VAA_00351
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_3
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
DUF6155
Motif
Other DBs
NCBI-ProteinID:
AEH34389
LinkDB
All DBs
Position
I:complement(3047678..3051706)
Genome browser
AA seq
1342 aa
AA seq
DB search
MVYSYTEKKRIRKDFGTRPQVLDIPYLLSIQLDSFDKFIEQDPEGQYGLEAAFRSVFPIQ
SYNGNSELQYVSYRLGEPVFDVKECQIRGVTYSKPLRVKLRLVIFDKDAPAGTVKDIKEQ
EVYMGEIPLMTDNGTFVINGTERVIVSQLHRSPGVFFDSDKGKTHSSGKVLYNARIIPYR
GSWLDFEFDPKDNLYVRIDRRRKLPASIILRALGKSTEEILDLFFEKVKFEVKDQTLLME
LVPERLRGETASFDIEANGTVYVEKGRRVTARHIRQLEKDNVDFIEVPVEYIVGKVASKD
YVNEATGEVIVSANQEISLEALANLSQAGYKKLEVLFTNDLDHGPFVSETLRIDSTVDRI
SALVEIYRMMRPGEPPTKEAAESLFESLFFSEERYDLSTVGRMKFNSSIEREDAGELGTL
DETDIIEVMKKLIAIRNGIGEVDDIDHLGNRRIRSVGEMAENQFRVGLVRVERAVKERLS
LGDLDAIMPQDLINAKPISAAVKEFFGPSQLSLFMDQNNPLSEVTHKRRISALGPGGLTR
ERAGFEVRDVHVTHYGRLCPIETPEGPNIGLINSLSAFARCNEYGFLETPYRRVVDGVVT
DEVDYLSAIQEGQFVIAQANAILTEEGTFADELITARQKGESGLHPREHVDYMDVATNQV
VSIAASLIPFLEHDDANRALMGANMQRQAVPTLRAEKPLVGTGIERNVAVDSGVTAVAKR
GGMVQSVDASRIVVKVNEDELVSGEAGIDIYNLTKYTRSNQNTCINQRPTVMPGEPVARG
DVLADGPSTDLGELALGQNMRIAFMPWNGYNFEDSILVSERVVQEDRFTTIHIQELSCVA
RDTKLGSEEITADIPNVGESALSKLDESGIVYIGAEVKGGDILVGKVTPKGETQLTPEEK
LLRAIFGEKASDVKDTSLRVPNSVSGTIIDVQVFTRDGVEKDKRALEIEHMQLKEAKKDL
TEEFQILEGGLLARVKAVLINGGYSEAKLDAIDRKKWLEQTLENDELQSQLEQLAEQWDE
LKADFDKKFEAKRRKITQGDDLAPGVLKIVKVYLAVKRRIQPGDKMAGRHGNKGVISKIN
PVEDMPYDENGQPVDIVLNPLGVPSRMNIGQILEVHLGLAAKGIGDKINQMVKEQQELSK
QREFLQKVYDLGDTRQKVDIAALSDGDVRTLVNNLRGGLPIATPVFDGASEASIKELLSL
ADLPTSGQLTLFDGRTGDAFERPVTVGYMYMLKLNHLVDDKMHARSTGSYSLVTQQPLGG
KAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDVNGRTKMYKNIVDGNHSMEPGMPE
SFNVLLKEIRSLGINIELEDEE
NT seq
4029 nt
NT seq
+upstream
nt +downstream
nt
atggtttactcttataccgagaaaaagcgcatccgtaaggactttggtactcgtccacaa
gtgttggacattccatacctgctatcgatccagctcgattcgttcgacaagtttatcgaa
caggatcctgaaggacaatacggtcttgaggctgcttttcgttctgtatttcctattcag
agctataacggcaattctgagctgcaatacgttagctatcgtcttggtgagccagttttt
gacgttaaagaatgtcaaattcgtggtgtaacttattctaagccactacgcgtaaaacta
cgcctagtgatctttgataaagacgcgccagcaggtactgtaaaagatattaaagaacaa
gaagtctacatgggtgaaattccactcatgacagacaatggtaccttcgtaattaatggt
actgagagggttatcgtatcccagctgcaccgaagcccaggcgtattcttcgacagcgat
aagggtaaaactcactcatcaggtaaagttctttataacgcacgtattatcccttaccgt
ggttcatggttagattttgagtttgatccaaaagataacctatacgtgcgtattgaccgt
cgtcgtaaactgcctgcatcgatcattcttcgtgcacttggtaaatcgacagaagagatc
ttggatctgttcttcgaaaaagtgaagtttgaagtcaaagaccaaactcttcttatggag
ttggtacctgagcgcctgcgtggcgaaacagcgtcatttgatattgaagcaaatggtacc
gtttatgtcgaaaaaggtcgtcgtgtaacggctcgtcatattcgtcaactagaaaaagat
aacgttgattttatcgaagtacccgttgagtacatcgttggtaaagtcgcttctaaagat
tatgtcaatgaagcaacgggtgaagtcatcgttagcgcaaaccaagaaattagcttggaa
gcattagcgaatctttcacaagcgggctataagaaacttgaagttctatttacgaacgat
cttgatcatggtccatttgtgtctgagacgctccgcatcgacagtacggttgatcgtatt
tctgcgctagtagaaatctaccgcatgatgcgccctggcgagccaccaacaaaagaagca
gccgaatcgctgtttgaaagcctattcttctcagaagaacgctatgacctatcaacagta
ggccgtatgaagttcaacagctcaattgagcgtgaagatgccggcgagcttggtacgctt
gacgaaactgacatcatcgaagtgatgaagaagttgatcgccattcgtaacggcattggc
gaagtggacgatatcgaccaccttggcaaccgtcgtattcgctctgttggtgaaatggct
gaaaaccaattccgcgtaggtcttgtgcgtgttgaacgtgcagtgaaagagcgcttaagc
cttggcgatcttgatgcgatcatgcctcaagatttgatcaatgcgaagcctatctctgcg
gccgttaaagaattcttcggtccttcacagctttctctgtttatggaccagaacaaccca
ctttcagaagtgacgcacaaacgtcgtatttctgcattgggtcctggcggtctaactcgt
gagcgtgctggctttgaggtacgtgacgtacacgtgactcactacggtcgtctatgtccg
atcgaaacgccagaaggtccgaacatcggtctgattaactcattgtcagcatttgcacgt
tgtaacgaatacggtttcctagaaactccgtaccgtcgtgttgttgatggtgtggtgact
gatgaagttgattacttgtcagctatccaagaaggtcaatttgttatcgcgcaggcaaac
gccattctgactgaagaaggtacgtttgcagatgagctgatcacagctcgtcaaaaaggt
gaatctggtcttcaccctcgtgaacatgttgactacatggacgttgcgaccaaccaggtc
gtatcaatcgccgcttcgcttatcccgttcctagaacacgatgatgcgaaccgtgcattg
atgggtgcgaacatgcaacgtcaagcggttccaacgttacgcgctgagaagccgttggtt
ggtactggtatcgaacgtaatgtagcggttgactctggtgtaactgccgttgccaaacgt
ggcggtatggtgcagtcagttgatgcgtctcgtatcgtagttaaagttaatgaagatgaa
cttgtatctggtgaagcgggtatcgacatctacaacctaactaaatacacacgttcgaac
caaaacacatgtattaaccaacgtcctactgtgatgccaggtgaacctgtagctcgcggt
gatgtccttgctgatggtccttcaacagaccttggtgagctagcgcttggccaaaacatg
cgtatcgcattcatgccttggaatggttataacttcgaagactcgatcttagtatctgag
cgcgtcgttcaagaagaccgtttcacgactatccacatccaagaactttcttgtgtggct
cgtgatactaagctgggctctgaagagatcacagcggatattccaaacgtaggtgaatcg
gctctgtctaaactagacgagtcaggtatcgtttacattggtgctgaagttaagggtggt
gacatcctagttggtaaagtaacgccgaaaggcgaaactcagctaactccagaagagaag
ctactacgtgcaatcttcggtgaaaaagcctctgatgttaaagatacgtcactgcgtgta
ccaaactctgtttcaggtaccattatcgatgttcaagttttcactcgcgatggcgtagag
aaagacaagcgtgcgcttgaaattgaacacatgcagctaaaagaagcgaagaaagatctt
accgaagagttccaaattcttgaaggtggtctactagcgcgtgtgaaagctgtactgatc
aatggtggctattctgaagcgaagcttgatgcgatcgatcgtaagaaatggctagaacaa
acactagaaaacgacgagctacaatctcaacttgaacagcttgctgagcagtgggatgag
ctaaaagctgacttcgataagaagttcgaagcgaaacgtcgcaaaatcactcaaggtgat
gatctagcgcctggcgttctgaagattgttaaagtttacctagcggtgaaacgtcgtatc
cagcctggtgataagatggcaggtcgtcacggtaacaagggtgtaatctctaagatcaac
cctgttgaagacatgccttacgatgaaaacggtcagccggttgatatcgtattaaaccca
ctaggtgtaccgtcacgtatgaacatcggtcagatccttgaagttcacttaggtctggct
gcgaaaggtattggtgacaagatcaaccaaatggttaaagaacaacaagagctgtctaag
cagcgtgagttcttacagaaggtttatgatcttggcgatacgcgtcagaaagtagatatt
gctgctctgtctgatggtgatgttcgtactcttgtgaacaaccttcgtggtggtttaccg
attgcaactccagtatttgatggtgcatcagaagcatcaatcaaagaactattaagccta
gccgacctaccaacttctggtcagctaacactgtttgatggtcgtactggtgatgcattc
gagcgtcctgtaactgtcggttacatgtacatgctcaaactgaaccaccttgttgatgac
aagatgcacgctcgttcaacaggttcgtacagcctagtaactcagcaaccacttggtggt
aaagctcagttcggtggtcagcgtttcggtgagatggaagtgtgggcactagaagcatac
ggtgctgcatatacactacaagaaatgcttactgttaagtcagatgacgttaacggtcgt
acgaagatgtataagaacatcgttgatggtaaccatagcatggaacctggcatgccagag
tctttcaacgtattgctgaaagagatccgctcgctaggtatcaacatcgagctagaagac
gaagagtaa
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integrated database retrieval system
