Vibrio anguillarum 775: VAA_00381
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Entry
VAA_00381 CDS
T01536
Name
(GenBank) hypothetical protein
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
van
Vibrio anguillarum 775
Brite
KEGG Orthology (KO) [BR:
van00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
van03009
]
VAA_00381
Enzymes [BR:
van01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VAA_00381
Ribosome biogenesis [BR:
van03009
]
Prokaryotic type
rRNA helicases
VAA_00381
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Helicase_C_2
UMPH-1
AAA_30
UvrD-helicase
AAA_11
AtuA_ferredoxin
Motif
Other DBs
NCBI-ProteinID:
AEH34006
LinkDB
All DBs
Position
I:2612648..2613883
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AA seq
411 aa
AA seq
DB search
MIKTFADLDLDPCIIAAIEDMGFERPTQVQAEAIPQALDGRDILASAPTGTGKTAAFVLP
ALQYLLDFPRKRAGPARVLILTPTRELAMQVADQARELAKNTRLNIVTITGGVQYQEHAD
ILAKTQDIVVATPGRLMEYIEGERFDCRAIEWLILDEADRMLDMGFGPIVDRLAAECRWR
KQTLLFSATLEGHGVEGFTADLLKEPATINADPSRRERKKITQWYHRADTMVHKVELLKK
ILTEQAERSIVFIKTRERLADLRTELEKAQIPCAWIQGEMPQDRRNNAITRFREGAVNVL
LATDVAARGIDLPDVSHVINFDMPRSADVYLHRIGRTARAGKKGNAISLVEAHDQVMMDR
VARYVDEEIKERFIKDMRPQHKKPVFKKKKKTDDKKVKVVSKKKKANKKKK
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaaaacctttgctgacctcgatcttgacccttgcatcattgcggccattgaagat
atgggctttgaacgtcccacccaagttcaagctgaagcgatcccacaagccctagatggt
cgagatattcttgcctctgcgccaacgggaaccggtaaaaccgctgcatttgttttaccc
gcgctacaatatcttttagattttccgcgcaagcgagccggccctgcacgcgtcttgatt
ctgaccccaactcgtgaattggcgatgcaagtggcggatcaagctcgtgaactggcgaag
aatactcgcctcaatatcgtcaccatcaccggcggcgtacaatatcaagagcacgccgac
atcttagccaaaacgcaagatattgtggtggcaacgcctggtcgcttgatggaatacatt
gaaggcgagcgttttgattgtcgtgcgattgaatggcttattttggatgaagctgaccgc
atgctggacatgggctttggcccaatcgtcgatcgtctcgctgcggaatgtcgctggcgt
aaacagaccttgcttttctctgcaacactggaaggtcatggtgtggaaggttttactgcc
gatctcttaaaagaaccagcaacaatcaatgccgatccttctcgtcgtgaacgcaaaaaa
atcactcaatggtatcaccgcgccgataccatggtgcacaaagttgagctattgaagaaa
atcctcaccgagcaagccgaacgttctatcgtgtttatcaaaactcgtgagcgcttagct
gatttgcgtacagagctagaaaaagcgcaaattccttgtgcttggattcaaggcgaaatg
ccacaagatcgtcgcaataacgccattacgcgattccgtgaaggcgcagtcaacgtacta
ctggcaaccgacgtggccgcacgcggtattgacttacctgacgtaagtcacgtgatcaac
tttgatatgccacgttcagcggatgtgtacttacaccgcataggtcgtacggctcgtgct
ggtaaaaaaggcaatgcgatctctttggttgaagcccatgatcaagtgatgatggaccgc
gtcgcgcgttatgtcgacgaggagataaaagagcgcttcattaaagatatgcgcccgcag
cacaaaaagccggtattcaaaaagaaaaagaaaaccgatgacaaaaaagtcaaagtggtt
tcgaagaagaagaaagcgaacaaaaagaaaaaatag
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