Vibrio anguillarum 775: VAA_00808
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Entry
VAA_00808 CDS
T01536
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
van
Vibrio anguillarum 775
Pathway
van03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VAA_00808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
van03019
]
VAA_00808
03016 Transfer RNA biogenesis [BR:
van03016
]
VAA_00808
Enzymes [BR:
van01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
VAA_00808
Messenger RNA biogenesis [BR:
van03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
VAA_00808
Transfer RNA biogenesis [BR:
van03016
]
Prokaryotic type
tRNA degradation factors
VAA_00808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
OB_RRP5_4th
S1_RRP5
KH_2
KH_SLS1_2
aRib
DUF3016
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
AEH34019
LinkDB
All DBs
Position
I:complement(2627320..2629446)
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AA seq
708 aa
AA seq
DB search
MFDKPVVKSFQYGNHTVTLETGVIARQATSAVMVTMNDTAVFVSVVGKKEAVEGQDFFPL
TVNYQERTYAAGKIPGGFFKREGRPSEGETLTARLIDRPIRPLFPNAFKNEVQVIATVMS
VNPDVQPDIVTMIGTSAALAISGIPFNGPIGAARVGHIDGQLVLNPSMTELAVSRLDLVV
AGTDNAVLMVESEADNLTEEEMLAAVVYGHDQQQAVIKAINEFAAEVATPAWDWVAPQEN
TVLNSKIAELAEAKLVEAYKITEKMARYDRIHEIAAEVNKVILAEDPEANAKEIHTIFHD
LEKTVVRRSIIAGNPRIDGREKDMVRALDVRTGILPRTHGSALFTRGETQAIVTATLGTQ
RDAQIIDELTGERKDNFLLHYNFPPYCVGETGFVGSPKRREIGHGKLAKRGIAAVMPSVE
EFPYTVRVVSEITESNGSSSMASVCGTSLALMDAGVPIKSSVAGIAMGLVKEGDDFVVLS
DILGDEDHLGDMDFKVAGTNQGITALQMDIKIEGITKEIMQIALNQAQGARKHILSVMDQ
AISGARAEISEFAPRIYTMKISSEKIKDVIGKGGAVIRALTEETGTTIEIEDDGTIKIAA
TDSAQAKEAIRRIEEITAEVEVGAIYTGKVARLADFGAFVNILPGKDGLVHISQIADQRI
EKVSDYLKEGQEVQVKVLEIDRQGRVRLSMKEAVEKPAEEVVAAPTAE
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgtttgataaaccagtagtgaaatcattccaatacggtaatcataccgtcactctagaa
accggcgttatcgcacgccaagctacatcggccgttatggtcactatgaacgataccgcg
gtattcgtttctgttgttggtaaaaaagaagcagtagaaggtcaagacttcttccctctt
actgttaactaccaagagcgtacttacgcagcgggtaaaattccaggtggcttcttcaag
cgtgaaggtcgtccatcagaaggcgaaactttgactgcgcgtctgattgaccgcccaatt
cgtcctcttttccctaatgcatttaaaaatgaagttcaagtcatcgcgacagtgatgtct
gtaaacccagacgttcaacctgatatcgtgactatgattggtacttcagcagcacttgct
atctctggcattccattcaatggtcctattggcgcggcgcgcgtgggtcacattgatggt
caattagtacttaaccctagcatgaccgagcttgcagtatctcgtcttgatcttgtggtt
gcaggtacagacaacgcagtgctgatggttgagtcagaagcggataacctaactgaagaa
gaaatgctagcagcggttgtttacggccacgaccaacaacaagctgtgattaaagcgatc
aatgaatttgctgctgaagttgccactccagcttgggattgggttgctcctcaagagaac
acagtacttaacagcaagatcgctgaactagcagaagctaagcttgttgaagcttacaaa
atcactgaaaaaatggctcgttacgaccgtattcatgaaattgctgctgaagtaaacaaa
gtaattcttgctgaagatcctgaagcaaatgcgaaagaaatccacactatcttccacgat
ctagagaagacggttgtacgtcgtagcattattgctggcaacccacgtattgacggtcgt
gaaaaagacatggttcgtgcgctagacgtacgcactggtattcttcctcgtactcacggt
tctgcactatttactcgtggtgaaactcaggcaatcgtaaccgctactcttggtactcag
cgtgatgctcaaatcatcgatgagctaacaggtgagcgtaaagataacttcctactacac
tacaacttccctccatactgtgtgggcgaaactggttttgtaggctctcctaagcgtcgt
gaaatcggccacggtaaactggctaagcgtggtatcgctgccgttatgccttcagtggaa
gagttcccatacacagttcgtgtcgtatcagaaatcacagaatctaacggttcatcttca
atggcttcggtatgtggtacttctcttgctctgatggatgcaggtgtaccaatcaagtct
tcagttgcaggtattgcaatgggtcttgttaaagaaggcgatgatttcgttgttctttct
gacattcttggtgatgaagatcacctaggtgacatggactttaaagtagcgggtactaac
caaggtatcactgcactgcaaatggacattaagatcgaaggtatcaccaaagagatcatg
caaattgcgctaaaccaagcacaaggtgcacgtaagcatatcctttctgtgatggatcaa
gcgatctctggtgctcgtgctgagatttctgaatttgcaccacgcatttacaccatgaag
atcagctctgagaaaatcaaagacgtgatcggtaaaggtggtgctgtgatccgtgctcta
actgaagagacgggcacaaccatcgaaatcgaagatgacggtacaatcaagattgcggca
accgatagcgctcaagctaaagaagcgattcgtcgcattgaagagatcacggctgaagtt
gaagtcggcgctatctatactggtaaggtcgctcgtctggctgattttggcgcgttcgtt
aacattcttcctggtaaagatggtctggtacacatttctcaaatcgcggatcaacgcatc
gagaaagtgtctgattacttgaaagaaggccaagaagttcaagttaaagtacttgaaatc
gaccgccaaggccgtgttcgtctaagcatgaaagaagcggtagagaaaccagctgaagaa
gttgttgcagcaccaacggctgaataa
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