Vibrio anguillarum 775: VAA_01066
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Entry
VAA_01066 CDS
T01536
Name
(GenBank) Exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
van
Vibrio anguillarum 775
Brite
KEGG Orthology (KO) [BR:
van00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
van03016
]
VAA_01066
Enzymes [BR:
van01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
VAA_01066
Transfer RNA biogenesis [BR:
van03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
VAA_01066
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AEH35220
LinkDB
All DBs
Position
II:complement(926315..928366)
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AA seq
683 aa
AA seq
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MIIVCPIAFVRKRNMFQDNPLLAQLKQQIQENLPKKEGTIKATEKGFGFLEVDSKNSFFI
PPPYMKKCLHGDKVVAIIRTENEKEVAEPQELLEPSLTRFIGRVKLYKGKLNVTPDNPQL
KRQSLKAKVQKGLNPEHFSEGDWVVAQLINHPLKDDSGFMVEITHKITDANDKIAPWWVT
LAENDLPNSEPAGIEHWQLKDDADLQRIDMTHLPFVTIDGASTKDMDDALFAQRTENGDF
TLTIAIADPTAYITPDDEMDSVARERGFTIYLPGRNIPMLPRDLADDLCSLMENEVRPAL
CCTVTVTKEGVIGDDITFFAANIKSHARLVYDHVSDWLETGTSADWQPSDQIASVVRDLY
DFSLARAQWRETYAVVFPDHPDYRFELSEDNDVVAIHADLRRSANRLVEEAMITANICAG
KTLKAHFGQGVFNTHAGFKPEKIADVVELVNPTGELEYTADNLATLEGFASLRRWLCKQE
TRYLDNRIRKYQAYSEIGNQPLPHYAMGLDIYATWTSPIRKYGDMINHRMLKAHILNKEP
VQTPDETVGEELALHRKHHKMAERNVGDWLYARTLVNEPSKGTRFTAEIFDINRAGMRVR
LLENGAAAFIPGSLILDNKERIECNAESGTLLVDKEVVFKLGDTLEVMLAEVNMENRSLI
AKPTQVFEPLPIPSEANTTTQGE
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgattatagtgtgcccaatcgcatttgttagaaaaagaaacatgtttcaagataatccg
ctccttgctcaactcaagcaacaaatccaagagaacttgcctaagaaagaaggcacgata
aaagccactgaaaaaggcttcggctttttagaagttgacagtaagaacagcttctttatt
ccgcctccgtatatgaagaaatgcctacacggagataaagtggtggccatcattcgcacc
gagaatgagaaagaagtggctgagcctcaagagctgcttgagccttcactaactcgcttc
attggccgtgtaaaactgtacaaaggtaagctgaatgtcacgcccgataacccgcaacta
aaaaggcaatcgctgaaagccaaggtgcaaaaaggattaaaccctgaacatttctctgaa
ggtgattgggttgttgcacagcttattaaccatccactgaaagacgatagcggttttatg
gttgaaatcacccataaaattacggatgccaacgataagattgcgccttggtgggtgact
ttagctgaaaatgacctgcctaacagtgagccggctggtattgaacattggcagctcaaa
gatgatgccgacctacaacgcatcgatatgacccaccttcctttcgtgaccatcgatggg
gcatcaactaaagatatggatgatgcactgttcgcccaaagaaccgagaacggtgacttc
acattaaccattgctattgcagacccaaccgcatacatcacgccagatgacgagatggac
agtgtcgcgcgtgagcggggtttcactatttatctccctggccgcaatatcccaatgttg
ccacgtgatttagccgatgatttgtgttcgttgatggaaaatgaagttcgccctgccctt
tgctgtaccgtaacagtgactaaagaaggtgtgattggcgatgacattaccttttttgcg
gccaacattaaatcgcacgctcgattggtttatgatcatgtatcagattggttagaaacg
ggcacttctgccgattggcaaccaagtgaccaaatcgcttccgttgtacgtgatttgtat
gatttttcattagcgcgcgcacaatggcgcgaaacatatgcagtcgtgtttcctgatcac
cctgattatcgatttgaactgagtgaagacaacgacgtagtggcaattcatgcggatctt
cgccgtagtgctaaccgtcttgttgaggaagcgatgataaccgcgaatatctgtgcggga
aaaacgctcaaagcgcattttggccaaggcgtgttcaatacgcacgcggggttcaaaccc
gaaaaaattgccgatgttgtcgaattagtcaacccaacgggtgagcttgaatacactgcc
gataacttagcgactctagaaggctttgcctctttacgtcgctggttatgtaagcaagag
acccgctatctggataatcgtatccgcaagtatcaagcttacagtgaaataggaaaccaa
cctcttccgcattacgcaatgggtttggatatctatgccacttggacttctcctatccgt
aaatatggcgatatgatcaaccatcgtatgttgaaagcacatattttaaacaaagagccc
gtacaaacaccggatgaaaccgttggtgaagagttggcactacaccgcaaacaccacaaa
atggccgaacgtaacgtaggcgactggctctatgctagaacgctagtaaacgaaccgagc
aaaggcacccgtttcacggctgaaatttttgatatcaatcgagctggcatgcgcgtacgt
cttttggaaaatggcgcagccgcattcattcctggttctttaatcttagacaacaaagaa
cgtattgaatgtaatgcggaaagtggaacgctgcttgtcgataaagaagtcgtctttaag
ctcggtgatacgctcgaagtcatgctcgcagaagtgaatatggaaaaccgcagtctgatt
gcaaaaccgactcaggttttcgaaccgttacctataccttcagaagctaataccactacc
caaggggagtga
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