Vibrio anguillarum 775: VAA_01106
Help
Entry
VAA_01106 CDS
T01536
Name
(GenBank) Serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
van
Vibrio anguillarum 775
Pathway
van00260
Glycine, serine and threonine metabolism
van00460
Cyanoamino acid metabolism
van00630
Glyoxylate and dicarboxylate metabolism
van00670
One carbon pool by folate
van00680
Methane metabolism
van01100
Metabolic pathways
van01110
Biosynthesis of secondary metabolites
van01120
Microbial metabolism in diverse environments
van01200
Carbon metabolism
van01230
Biosynthesis of amino acids
van01240
Biosynthesis of cofactors
van04981
Folate transport and metabolism
Module
van_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
van00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
VAA_01106
09102 Energy metabolism
00680 Methane metabolism
VAA_01106
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
VAA_01106
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
VAA_01106
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
VAA_01106
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
VAA_01106
Enzymes [BR:
van01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
VAA_01106
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
AEH33727
LinkDB
All DBs
Position
I:complement(2320089..2321339)
Genome browser
AA seq
416 aa
AA seq
DB search
MLKRDMNIADYDADLFAAIQEETLRQEEHIELIASENYTSPRVMEAQGSQLTNKYAEGYP
GKRYYGGCEFVDKVETLAIERACELFGADYANVQPHSGSQANNAVYMALLNAGDTVLGMS
LAHGGHLTHGSPVNFSGKLYNIIPYGIDAKGQINYEEMEALAVEHQPKMIIGGFSAYSQV
CDWKRMREIADKVGAYLFVDMAHVAGLIAAGVYPNPVPHAHVVTTTTHKTLAGPRGGLIL
SNAGEDLYKKLNSAVFPGGQGGPLMHVIAGKAVAFKEALEPEFKEYQKRVVANAKAMVAE
FLARGYNIVSGSTENHLFLVDLIDKNITGKDADAALGAANITVNKNSVPNDPRSPFVTSG
IRVGSPSITRRGFTEADAKALAGWMCDILDNMGDESVIQATKAKVLEICKRLPVYA
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgcttaagcgtgatatgaacatcgcagattacgatgcggacctgttcgcagctattcaa
gaagagactcttcgtcaggaagaacacattgaacttatcgcttcggaaaactacacaagt
ccacgtgtaatggaagcgcaaggttcacagctcaccaataaatacgctgaaggttaccca
ggtaaacgctattacggtggttgtgagtttgtcgataaagtagaaacactggcgattgaa
cgtgcgtgtgaactgtttggcgcagactatgcgaacgtgcagccgcattctggctcacaa
gcaaacaacgcggtttatatggcgttgcttaacgcaggtgataccgtattaggaatgagc
ttggcacacggtggtcatttgactcacggttctcctgtcaacttttccggtaagctgtac
aacatcattccttatggcattgatgcaaaaggtcaaattaattacgaagagatggaagca
ttagcggttgagcatcagccaaaaatgatcatcggtggcttctctgcttattcacaagtt
tgcgactggaaaagaatgcgtgaaattgctgataaagtgggcgcttacttgtttgttgat
atggcgcatgtagctggtttgattgcggcgggtgtttaccctaacccagttcctcatgcc
cacgtagtgacgaccactacccacaaaacactggcaggtcctcgtggtggccttattctt
tcgaatgcaggtgaagacttatataagaagcttaactcagccgtattccctggtggtcaa
ggtggtcctttaatgcacgttatcgcaggtaaagcggtcgcgttcaaagaagctctagaa
ccagagttcaaagagtatcaaaaacgcgttgtcgccaatgcgaaagcgatggtggccgag
tttttggctcgtggttacaacattgtttcaggttccacagaaaatcacctgttccttgtc
gatttgatcgataaaaatattacaggtaaagatgctgatgcggcattgggtgcggctaac
attacagtgaacaaaaactctgtaccgaacgatccgcgtagcccatttgtcacctctggc
atccgcgtgggttctccatcaattactcgccgtggttttactgaagctgatgcgaaagca
ctagctggatggatgtgtgatattttggacaacatgggtgatgaatctgttattcaagca
acgaaggcaaaagtgttagaaatttgtaagcgtttgcctgtatacgcgtag
DBGET
integrated database retrieval system