Vibrio anguillarum 775: VAA_01399
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Entry
VAA_01399 CDS
T01536
Name
(GenBank) cell wall degradation protein
KO
K21470
L,D-transpeptidase YcbB
Organism
van
Vibrio anguillarum 775
Brite
KEGG Orthology (KO) [BR:
van00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
van01002
]
VAA_01399
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
van01011
]
VAA_01399
Peptidases and inhibitors [BR:
van01002
]
Cysteine peptidases
Family C82
VAA_01399
Peptidoglycan biosynthesis and degradation proteins [BR:
van01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
VAA_01399
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AEH33084
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All DBs
Position
I:1604287..1605840
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AA seq
517 aa
AA seq
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MSKSILFALLLIFSSFSLYSAEKVQPFAVSQENASLQSFIQYPHLVERIYQENENRRIWQ
DEQIVRQFEHQLEVIRRAGFSPLFSRQLAQMKAYRNQQAFNEYDLLATDTLLLYLSYAEQ
APKVGMAWFFESKLNSAIAPPSQEALFALHVAVEVNSIGDLLNGYAPSNAAYDQLLHAYD
FLLSTENAALSLYSQKGLKKPGDKLSQRSVLIARLSLVNIDVSTVRDDVTWYDNSLVKPV
KEFQAMHGLKADGMIGPETLKWLNLSLQARLSMLALNAERTRLWPESKETQIVVNVPSFD
MRYWYLGKEVFQSKVVVGRVSRKTPLMSTKLDSLILNPTWNVPHKIMVEDILPMVKKDQN
YLRQHNIDIVSSWRSNDQIDPSNINWSAVNPASFPYRMRQQAGQDNALGLYKFNTPNRRA
IYLHDTPSKYLFNNTSRAFSSGCIRVQNADKFASMILETQGINGDKLTGKEGPANGTIPL
KQRIPVHIIYQTVWYEGGELHYRDDIYRYDAFSTSNG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaagcatcctatttgctttattattgatttttagtagcttttctctttactct
gccgagaaggtacagccttttgctgtctcgcaagagaatgcctcgttgcaatcttttatc
caatatccgcatttagtcgaacgaatttaccaagagaatgagaatcggcgcatttggcaa
gatgagcagattgttcgtcaatttgaacatcaattggaagtgattcgccgagcggggttt
agccctttattttcacgccagttagcgcaaatgaaagcgtaccggaatcagcaagcgttc
aatgaatacgatctgctggcgaccgatactttacttttgtatttgagttatgccgagcaa
gctcccaaagtcggtatggcttggttctttgaaagtaagctcaactctgccattgctcca
ccaagccaagaagccttgttcgcccttcatgttgcggtggaagttaacagtatcggcgat
ctgctcaatggctatgcgccgagcaacgcggcttatgatcaactgctacacgcctatgat
tttctgctcagtactgaaaatgcagcgctctcgttgtacagccaaaaagggttaaaaaaa
cctggcgataagctctcacaacgtagtgtgcttattgcccgcttatcattagttaatatc
gatgttagcacagtgcgtgacgacgtaacttggtatgacaacagcttggtcaaacctgtg
aaagagtttcaagcgatgcacggtttaaaagctgatggcatgattggccccgagacctta
aagtggttaaatttgtctttgcaggcacgcctgtctatgttggcattaaatgcagagcga
actcgtttgtggccagaatcaaaagagacacagatcgtagtcaacgttcccagttttgat
atgcgctactggtatttaggtaaagaagtctttcagtctaaagtggtggtgggccgagtt
tcacgcaaaacgccactcatgagcaccaaattagattctttgatcctaaacccgacgtgg
aatgtgccacacaaaatcatggttgaagatattctgccgatggtaaaaaaagatcaaaac
tatttgcgtcaacacaatattgatattgtttcgagctggcgctcgaacgatcaaattgac
ccaagcaacatcaactggtctgcagtgaatccggcctcttttccctaccgaatgcgtcag
caagccgggcaagataatgcattaggtctgtataaatttaatacgcccaatcgtagagcg
atttacctacatgatacgccgagtaaatacctattcaataatacgtcgcgagcctttagt
tcgggttgtattcgagtacaaaatgccgataagtttgcttcgatgatattagaaacccaa
ggtattaatggtgataaattaacgggtaaagaagggcctgcgaatggcacgatcccatta
aagcagcgcatccccgtacacatcatctatcaaaccgtttggtatgaaggtggggaactg
cactaccgagatgatatctatcgttatgatgcattcagtaccagtaatgggtga
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