Vibrio anguillarum 775: VAA_01407
Help
Entry
VAA_01407 CDS
T01536
Name
(GenBank) DNA polymerase III, epsilon chain
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
van
Vibrio anguillarum 775
Pathway
van03030
DNA replication
van03430
Mismatch repair
van03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
VAA_01407
03430 Mismatch repair
VAA_01407
03440 Homologous recombination
VAA_01407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
van03032
]
VAA_01407
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_01407
Enzymes [BR:
van01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
VAA_01407
DNA replication proteins [BR:
van03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
VAA_01407
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
VAA_01407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
CAF1
Motif
Other DBs
NCBI-ProteinID:
AEH33092
LinkDB
All DBs
Position
I:complement(1613405..1614133)
Genome browser
AA seq
242 aa
AA seq
DB search
MRVMIKQWFQKPSIDWVAKYANKQSLVNHPLLKDFYSRPIAKGSTPIDEIEFVALDLETT
GLSAQHDDIITIGLVPFTLNRIYLNRSKHWIVRPRQALKEDSVVIHGITHNDILDAPDLA
EVQESILKALSGKIVVVHYRHIERSFLNQALKVRLGEGIEFPVIDTLQLETEIQQRLHGG
LWNQLKGQKPQSVRLGQARARYGLPAYTPHHALVDAIATAELFQAQIAHHFDRQQSVRTL
WL
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
gtgagagtgatgattaaacaatggtttcaaaaaccgagcatcgattgggtagcaaaatat
gccaataagcagtcgttggttaaccatccgttactcaaagatttttattcaaggccaatt
gctaagggtagcacgccaatcgatgaaatagagtttgtcgctttagatttggaaacaacg
ggtttaagtgcgcagcatgatgacattatcaccattggcttggtgccttttaccttaaac
cgtatctatctcaaccgctctaaacattggatagttcggccacgccaagcgttaaaagag
gattcggtggttatccatggcatcacacacaacgatattttagatgcgccagatttggca
gaagtgcaggagtcgatactgaaggccttatctggaaaaattgttgtggttcattaccgt
catattgaacgtagctttctcaatcaagcattaaaagtgcgattgggtgaaggtattgag
ttccctgtgatcgatactttgcaattggaaacggaaattcaacaacggttgcatggaggt
ttatggaaccagttaaaagggcaaaaaccacaatcagtgcgtttagggcaagcgcgggcg
cgttatgggctaccagcgtacactccacaccacgctttagttgatgccattgccaccgcg
gaattattccaagcacaaatcgctcatcattttgatcggcagcaaagtgtccgaacgttg
tggctataa
DBGET
integrated database retrieval system
