Vibrio anguillarum 775: VAA_01450
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Entry
VAA_01450 CDS
T01536
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
van
Vibrio anguillarum 775
Pathway
van03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VAA_01450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
van03019
]
VAA_01450
Enzymes [BR:
van01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
VAA_01450
Messenger RNA biogenesis [BR:
van03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
VAA_01450
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
DUF8086
CMS1
KAR9
Motif
Other DBs
NCBI-ProteinID:
AEH33135
LinkDB
All DBs
Position
I:complement(1664755..1666212)
Genome browser
AA seq
485 aa
AA seq
DB search
MLAPFRNVMRITSLFTYRDILMSFASLGLSHAILKAVASQGYETPSPIQAQAIPAVLEGK
DVMAAAQTGTGKTAGFTLPILDLLVKGPKVGPNQVRALILTPTRELAAQVADNVATYGQN
LPLRSEVIFGGVKVNPQMMKMRRGVDILVATPGRLLDLYNQNAIKFNQLEILVLDEADRM
LDMGFIRDIKKILALLPAKRQNLLFSATFSDEIRQLAKGLVNNPVEISVTPRNSTAKTVK
QWVHPVDKAKKPALLIQLIKENNWQQALVFTRTKHGANRLTAQLEGSGISAAAIHGNKSQ
GARTKALANFKSGEIRILVATDIAARGIDIDQLPQVVNFELPNVPEDYVHRIGRTGRAGA
EGNAISLVCADEAKDMFAIERLTQNLLERIEVEGFAPVNKLPASPSLQPIKAKKPKKNKP
EHNDGQRSGDVAKGHSISANTKTNDRKPKAANSTRSNSNKPSANQTRNGSAGQNRPRRTN
KIAAS
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgcttgcgcctttccgcaacgtgatgcggatcacttccttatttacatatcgagacatt
ttaatgagttttgcctctctgggtttatcccatgccatcctgaaagccgttgcttctcaa
ggttacgaaacaccatcgccaattcaggcgcaagctattccagccgttcttgaaggcaaa
gatgtgatggcagcggcccagacaggtaccgggaaaacagcaggatttaccctgcccatt
ttggatctattagttaaaggcccaaaagtaggccccaaccaagtgcgtgcattaattctg
acgccgacacgtgaattggccgcgcaagttgccgacaacgtggcaacttacggacaaaac
cttccactacgctctgaagttattttcggcggtgtgaaagttaacccacagatgatgaaa
atgcgtcgtggagtagatattttggtcgcgacgccgggtcgactgttggatttatacaac
caaaatgcgattaaatttaaccaattagaaattttggtcttagacgaagcggatcgcatg
ttagacatgggcttcattcgtgacattaaaaagatccttgcactgctgccagcaaaacgt
caaaacctactcttttcggccactttctctgatgaaattcgccaacttgcgaaagggtta
gttaacaacccagtcgagatttcggttacgccacgcaatagtaccgccaaaaccgtcaaa
cagtgggtacatcctgtagataaagcgaaaaaaccagcgctattgattcaactaatcaaa
gaaaataattggcaacaagcgttggtatttacacgaactaaacacggcgctaatcgctta
accgcacaacttgaaggcagtggcatcagcgccgccgctattcatggcaacaaaagtcaa
ggcgcacgtactaaggcattggccaattttaaaagtggtgagatccgcattttagtagca
acggatattgccgctcgcggcattgatattgaccaattaccacaagtggtaaactttgaa
ttgcctaacgtccctgaagattatgttcaccgaattggccgtacaggccgcgcaggcgct
gaaggaaatgcaatctctttggtctgcgccgatgaagcaaaagacatgtttgccattgag
cgccttacccaaaatttactagaacgaattgaggttgaaggctttgcgccagtgaacaaa
ttaccggcatctccttcgctacaaccgattaaagcgaaaaagccgaaaaagaacaaacca
gaacataatgacggacagcgctctggtgatgtagcaaaaggtcacagcataagcgcgaat
accaaaactaatgacagaaagccgaaagcggccaattccactcgttcaaacagcaacaaa
ccaagtgcaaaccaaacgagaaacggatcggctggacaaaatagacctcgtagaacaaac
aaaatcgcggcgagctga
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