Vibrio anguillarum 775: VAA_02000
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Entry
VAA_02000 CDS
T01536
Name
(GenBank) DNA/RNA helicase (DEAD/DEAH box family)
KO
K19789
DNA repair protein RadD
Organism
van
Vibrio anguillarum 775
Brite
KEGG Orthology (KO) [BR:
van00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_02000
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factor
VAA_02000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ResIII
Helicase_C
DEAD
SWI2_SNF2
SLFN-g3_helicase
AAA_22
DZR
DUF7577
zf-tcix
ERCC3_RAD25_C
AAA_30
AAA_16
T1R_D3-like
SNF2-rel_dom
Motif
Other DBs
NCBI-ProteinID:
AEH33376
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All DBs
Position
I:1934765..1936507
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AA seq
580 aa
AA seq
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MYTLRPYQSDSVKAVIHYFRHHTTPAVIVLPTGAGKSLVIAELARLAKGRVLVLAHVKEL
VEQNHAKYEGYGLQGAVFAAGLGRKETDQQVVFASVQSVVRNLDAFKNQFSLLVIDECHR
VPDEKSSSYQKVITHLSELNPGIKVLGLTATPYRLGMGWIYQYHTRGQVRSEEPRFFRDC
IFELPIRYLLDEAFLTPARMVDAPVLSYDFSQLKPANTGRYKEAELDMVIEQSKRATPQI
VQQIIQLAQQKQGVMIFAATVRHAQEIVQLLPNNETAIVIGDTPTPERDTIIKQFKQRQI
KFLVNVSVLTTGFDAPHVDLIAILRPTESISLYQQIVGRGLRLSAGKTECLVLDYAGNNY
DLYQPEVGEPKPDPNSEIITIPCPACGFNNNFWGKLDAAGFLLEHYGRRCQGYFTDEESG
EREHCGYRFRAKYCGECGADNDIAARICHECDATLVDPDKKLKEALNLKDALVFECIEMD
LNVHKDASGKAQLRVTYRGENDAQVHEFWPLTTKKQKQVFHDQFVRPHLADKHRPFDQSS
PSKVVAHQHRFRPPQFVIARKVGRFWKMRDKIFEDELQNR
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtacacacttcgtccttatcaatcggactcggtcaaagccgtgatccactattttcgt
catcacactacgcccgccgtaattgtactaccgacgggggcaggaaaaagtttggttatt
gctgagctggcaaggcttgccaaaggacgagtcttagtactagcgcacgtgaaagaactg
gtagagcaaaaccatgccaaatatgagggctacggtttgcaaggcgcggtatttgcggca
ggtttaggacgaaaagagaccgatcaacaggtcgtctttgcttcggtacaatccgtggtg
cgcaatttagatgcctttaaaaatcaattttcattactggtgattgatgaatgccaccgc
gtaccggatgagaaaagtagtagctatcaaaaggtgatcacccatttaagcgagctcaac
ccggggattaaagtgttggggttaaccgctacgccttatcgtttaggcatgggctggatt
tatcaataccatactcgcggccaagtgcgcagtgaggagcctcgcttcttccgtgactgt
atttttgagctaccgatccgttatctgctcgatgaagcttttttaacgccagcgcgaatg
gttgatgcccccgtgctcagttacgatttttcgcagctaaaaccagccaataccgggcgc
tacaaagaagccgaactcgacatggtgattgagcaatcgaaacgtgccacaccacagatt
gtccaacaaatcatccaactagcacagcaaaaacagggagtaatgatctttgcagccacc
gttcgccacgctcaagaaattgtgcaattactgcccaacaacgaaactgccatcgtcatt
ggtgacacgccgacccctgaacgcgacaccatcatcaagcagtttaaacagcgccaaatc
aaattcttagttaacgtgtcggtattaaccacaggttttgatgctccgcatgttgacctg
attgcgattttacgccccaccgagtccatcagtttatatcagcaaattgtcggacgtggg
ctacgcttatccgcaggaaaaaccgaatgtttggtattggattatgcgggcaataactat
gatctttatcaaccagaagtcggtgagccaaagcccgatcccaacagtgaaattattacc
attccctgtccggcctgcggttttaataacaacttttggggtaaactcgatgccgctggt
tttttgcttgaacactatggtcgacgttgccaaggctattttacagacgaagaaagtggc
gaacgagaacactgtggttaccgttttagagcaaaatattgcggtgagtgtggggctgac
aacgatatcgccgcacgtatctgccatgaatgtgacgcaacactggttgaccctgataaa
aagctcaaagaggcactcaacctcaaagatgcattggtttttgaatgtatcgaaatggat
ttgaatgtacataaagatgcaagtggaaaagcgcaactgcgcgttacctatcgtggtgag
aacgatgcgcaagtccacgaattttggccactaaccaccaagaaacagaaacaagtgttc
cacgaccaatttgtgcgaccacacctagccgataagcatcgcccttttgatcaatcttca
ccaagcaaagtcgtggctcatcaacaccgttttcgtccaccacaatttgtcattgcgcga
aaagtgggacgattttggaaaatgcgcgataagatctttgaagatgagctacaaaaccga
tga
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