Vibrio anguillarum 775: VAA_02178
Help
Entry
VAA_02178 CDS
T01536
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
van
Vibrio anguillarum 775
Brite
KEGG Orthology (KO) [BR:
van00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
van03032
]
VAA_02178
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_02178
Enzymes [BR:
van01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
VAA_02178
DNA replication proteins [BR:
van03032
]
Prokaryotic type
DNA Topoisomerases
VAA_02178
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
VAA_02178
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AEH33442
LinkDB
All DBs
Position
I:complement(2002392..2005022)
Genome browser
AA seq
876 aa
AA seq
DB search
MGKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTAGQSTAKKATSSSSSKNLSAE
EKARLKSEKDRSSLIKKMGIDPYHGWEANYQILPGKEKVVAELQKLAKDADCIYLATDLD
REGEAIAWHLREIIGGDEQRYKRVVFNEITKNAIQQAFQTPGELNIDGVNAQQARRFMDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLLVEREREINAFVPEEFWDIHADTKTQDKTD
FRLLVAQKNDVAFKPVNEAEAKSAVSILEKASYEVCKREDRPTSSKPSAPFITSTLQQAA
STRLGYGVKKTMMLAQRLYEAGYITYMRTDSTNLSAEAVEAVRSYIGSEFGQAYLPENPL
AYGSKQGAQEAHEAIRPSSVDVKADDLQGMEADAHKLYALIWNQFVACQMTPAQYDSTTV
SVKAAEFTLKAKGRILKFDGWTRVQRPMGKNEDQILPPVKVGETLLLQTLDPKQHFTKPP
ARYTEAALVKELEKRGIGRPSTYASIISTIQDRGYVKVDQRRFYAEKMGEIVTDRLDDSF
NDLMNYDFTARMEEKLDQIAAGSANWKGVLDDFFKDFTADLETAELDEEQGGMKPNHIVM
TDIQCPTCSRPMGIRTASTGVFLGCSGYALPPKERCKTTINLGDEEGVINVLEEDVETAA
LRAKKRCPICETAMDAYLIDDTRKMHVCGNNPNCEGYVVEFGEFKVKGYDGPVVECDKCG
SNMVLKNGRFGKYMDCTSDDCKNTRKILRSGEVAPPKEDPIHFPELPCENSDAYFVLRDG
ASGLFLAASNFPKSRETRAPLVEELARFKERLAPKYQYLADAPAHDPDGVAAVVRFSRKS
KEHYVRTEIDGKPSGWTALYDNGRWEITDKRKNAKK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaatcactcgttatagtggaatcgccagccaaggctaaaacgatcaataaatat
cttggtaaagattttattgttaagtcgagcgtagggcatgttcgtgatcttccaaccgca
ggtcaaagtaccgctaaaaaagcaacgtctagttcttcttcaaagaaccttagcgctgaa
gagaaagcacgcttgaaaagcgagaaagaccgcagttcgttaattaagaagatgggcatc
gacccttatcacggctgggaagcgaattaccaaattttgccgggtaaagaaaaagtagtg
gcggaattgcaaaagcttgctaaagatgccgactgcatttatctcgcaaccgatttggac
cgcgaaggagaggccatcgcttggcaccttcgtgagatcatcggtggcgatgaacagcga
tacaaacgagttgtatttaacgaaattactaaaaatgcaatccaacaagccttccaaaca
ccgggtgaattgaatatcgacggtgtaaacgcccaacaagcgcgtcgtttcatggaccgt
gtggtgggttttatggtctctccattactttggaaaaaagtggcgcgtggattgtctgcg
ggtcgcgtccaatcggtggcggtgaaattacttgttgagcgtgagcgtgaaattaacgcg
tttgtccctgaagagttctgggatatccatgctgatacgaaaacgcaagataaaacggat
ttccgtctgttggttgcgcaaaaaaatgatgtagcgtttaagcctgtcaacgaagcggaa
gctaaatcagcagtttcgattttagaaaaagcttcttacgaagtgtgtaaacgtgaagac
cgcccaaccagcagtaaaccttccgctccttttatcacctcgacgttacagcaagcagcc
agtactcgcttgggttacggagtgaagaaaacgatgatgctagctcagcgcttgtatgag
gcgggttacatcacttatatgcgtaccgattcaaccaacttaagtgctgaagcggtcgaa
gcggttcgcagctatattgggagtgagtttggacaagcctacttacctgagaatccgtta
gcttatggaagtaagcagggcgctcaagaagcgcacgaagcgattcgtccatccagtgtg
gatgttaaagccgatgatttacaaggtatggaagcggatgctcataagctatacgcacta
atctggaatcagtttgttgcttgccaaatgacgccagctcaatacgattcgaccacggtg
agcgtgaaagcggcagaatttacccttaaggcgaaaggtcgcatccttaaatttgatggt
tggacacgagttcaacgtccaatgggtaagaatgaagaccaaattttacctccagtgaaa
gtgggcgaaacgttgttattgcaaacgttagatccaaaacaacatttcactaagccaccg
gcacgttatacggaagctgcgttggtaaaagagcttgaaaagcgtggtataggccgacca
tcgacgtatgcttctatcatctctaccattcaagatcgcggctatgtgaaagtggatcag
cgacgtttttatgctgagaaaatgggtgaaatcgtcaccgatcgtctggatgacagtttc
aatgacttgatgaactatgacttcaccgcgcgaatggaagaaaagctggaccaaattgca
gcaggatctgcaaattggaaaggagtcttggacgatttctttaaagatttcactgcagat
ttagaaacggctgaactggatgaagaacaaggtggtatgaaacccaaccacatcgtgatg
accgacattcaatgtccgacatgttcacgtccaatgggaattcgtacagcctctacaggg
gtgttcctcggttgttctggttatgcactgccgcctaaagagcgttgtaaaaccaccatt
aacctaggtgacgaagaaggcgtcatcaatgtcttggaagaagatgttgaaacggctgca
ctgcgcgctaaaaaacgttgtcctatctgtgaaacggcgatggatgcgtacctaatcgat
gacacacgtaaaatgcatgtgtgcgggaacaatccgaactgcgaaggttacgttgtagaa
ttcggtgagtttaaagttaaaggctatgatggcccagttgtcgagtgtgacaagtgtggg
tcaaacatggtactgaaaaatggccgttttggtaagtacatggattgcaccagcgatgac
tgtaaaaatacgcgtaagatcttaagaagcggcgaagttgctccaccaaaagaagatccg
atccatttccctgaattgccttgtgaaaactcggatgcgtattttgtactgcgtgatggc
gcttcaggtctgtttcttgcggcgagcaatttccctaaatctcgtgagacacgtgcgcca
ttggttgaagaattggctcgtttcaaagagcgcctagcaccaaagtatcaatacttagct
gatgcgcctgcacatgatcctgatggtgtggcggcggttgtacgctttagtcgtaagtca
aaagaacactatgtacgcactgagatagatggtaaaccctcaggttggacggcgttgtac
gataatgggcggtgggaaattaccgataagcgtaaaaacgctaaaaaatag
DBGET
integrated database retrieval system
