Vibrio anguillarum 775: VAA_02412
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Entry
VAA_02412 CDS
T01536
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
van
Vibrio anguillarum 775
Pathway
van03420
Nucleotide excision repair
van03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
VAA_02412
03430 Mismatch repair
VAA_02412
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_02412
Enzymes [BR:
van01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VAA_02412
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
VAA_02412
MMR (mismatch excision repair)
Other MMR factors
VAA_02412
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
AAA_12
AAA_11
PhoH
Motif
Other DBs
NCBI-ProteinID:
AEH31928
LinkDB
All DBs
Position
I:356840..359014
Genome browser
AA seq
724 aa
AA seq
DB search
MMDPSLLLDGLNDKQREAVAAPLENLLVLAGAGSGKTRVLVHRIAWLISVENASPFSVMS
VTFTNKAAAEMRGRIEELMMGSASGMWNGTFHGICHRILRAHYLDARLPEDFQILDSEDQ
LRLLRRLIKAQNLDEKQWPTRQVCWWINGKKDEGLRPKHIDAYRDPVTQTYLQLYSAYQE
ACDRAGLVDFAEILLRCHEMLRDKQHIREHYQARFKHILVDEFQDTNNIQYAWLRMMAGR
DCHVMIVGDDDQSIYGWRGAKIENLEKFTQEFPSVNTIRLEQNYRSTKTILQASNALIAN
NTERMGKELWTDGSEGEPISIYSAYNDLDEARFTVNKIKEWRDKGGALEDCAMLYRNNAQ
SRVLEEALIQAGLPYRIYGGMRFFERQEIKDALSYLRLMSNRNDDSAFERVVNTPPRGLG
DKTLETIRFAARDRGCTLWQASLVLLEEKVLTGRAASALSRFIELVNALEDDSAEMPLHS
QTDHVIKTSGLFEMYQLEKGEKSKARIENLEELVTATRQFEKPEEADEMSMLTAFLTHAA
LEAGEGQADEFDDAVQLMTLHSAKGLEFPLVFMVGVEEGMFPSQMSAEEAGRLEEERRLC
YVGMTRAMQKLYITYAEIRRLYGQDKYHKPSRFIRELPENCLDEVRMKAQVSRPSSAGRF
SQTAVKENFNETGFSLGARVKHPIFGEGTIINFEGSGPQSRVQVAFNGEGIKWLVTAYAK
LEKL
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgatggatccttctctcttactcgacggtctcaacgataaacagcgcgaagcggttgcc
gcgcctttagaaaacttgctggtgcttgccggagcggggagtggtaaaacccgagtattg
gtgcatcgcattgcttggcttatctcggttgaaaacgcctcgcctttttcagtgatgtcg
gtgacttttaccaacaaagcggcggcggaaatgcgtggccgaattgaagagttgatgatg
ggcagcgcatcgggcatgtggaatggtaccttccacggtatttgccaccgtattttacgc
gctcactatcttgacgctcgcctgcctgaggattttcagatcctcgattctgaagatcaa
ctgcgtttgctgcgtcgtttaatcaaagcacaaaacctagatgagaagcagtggcctacg
cgccaggtgtgctggtggattaacggtaaaaaagatgaaggtcttcgtccgaagcacatc
gatgcgtaccgcgatcccgtgactcaaacctatttgcagctttattccgcgtaccaagag
gcgtgcgatcgcgcaggtttggttgattttgccgaaattttgctgcgttgccacgagatg
ttgcgtgataagcagcacattcgtgaacattatcaagcgcgctttaaacacatcttggtc
gacgaatttcaagacaccaataacatccaatacgcgtggctgcgcatgatggctgggcgc
gattgccacgtgatgatcgtcggtgatgatgatcagtccatttatggctggcgtggtgcc
aaaattgaaaacctcgaaaaattcacgcaggaatttccgagcgttaataccattcgttta
gagcaaaactaccgttcaaccaaaaccattttgcaagcctcgaacgcactgatcgcgaac
aacaccgagcgaatgggtaaagagctctggacagatggcagcgaaggcgagccaatttct
atctattcggcctacaacgatcttgatgaggcgcgttttaccgtcaataaaatcaaagag
tggcgagataaaggtggcgcattagaggattgtgcgatgctttatcgcaacaacgcccaa
tctcgtgttttggaagaagccttgattcaagcaggcttgccctatcgcatctacggcggc
atgcgcttcttcgagcgccaagagatcaaagatgcgttaagttacttgcgtttgatgtct
aaccgcaatgatgattcggcctttgagcgagtcgtaaatacgccaccgcgtggcttgggt
gataaaacgctggaaaccattcgttttgcggcgcgagatcgcggttgtaccttgtggcaa
gcgagccttgtgctgttggaagaaaaagtgctcacaggacgtgcggcaagcgcattaagc
cggtttattgagctggtcaatgcccttgaagatgatagcgctgagatgccgttacacagt
caaaccgaccatgtaatcaaaacctctggcttgtttgagatgtatcagcttgaaaagggt
gaaaagtccaaagccagaattgaaaacttggaagaactagtcaccgcaacacgccaattt
gaaaagccagaagaagcggatgagatgagcatgttgacggcctttttaacccacgcagcg
ctggaagcgggcgaagggcaggctgacgaatttgatgatgccgtacagttaatgacactg
cacagcgcgaaagggttagagttcccgttggtgtttatggttggcgttgaagagggcatg
ttccccagccaaatgtcggccgaagaagcggggcgattggaagaggagcgccgtttgtgt
tacgtcggaatgacgcgcgccatgcaaaagctctacattacttacgctgaaattcgccgt
ttatacggtcaggataaataccataagccgtcacgctttatccgtgagctgccagaaaac
tgccttgatgaagtgcgcatgaaagcgcaagtgagccgaccaagcagtgccgggcgtttt
agtcaaacagcggtcaaagagaactttaacgagacgggctttagcttgggcgcacgcgtg
aaacaccctatttttggtgaaggcaccatcattaatttcgaaggtagtggtccgcaaagt
cgagtgcaagtcgcttttaacggtgaaggcattaaatggctagtgactgcttatgccaag
ctagagaaactatga
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