KEGG   Vibrio anguillarum 775: VAA_02548
Entry
VAA_02548         CDS       T01536                                 
Name
(GenBank) Exonuclease family protein
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
van  Vibrio anguillarum 775
Pathway
van03030  DNA replication
van03430  Mismatch repair
van03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:van00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    VAA_02548
   03430 Mismatch repair
    VAA_02548
   03440 Homologous recombination
    VAA_02548
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:van03032]
    VAA_02548
   03400 DNA repair and recombination proteins [BR:van03400]
    VAA_02548
Enzymes [BR:van01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     VAA_02548
DNA replication proteins [BR:van03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     VAA_02548
DNA repair and recombination proteins [BR:van03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     VAA_02548
SSDB
Motif
Pfam: RNase_T Rv2179c-like DNA_pol_A_exo1 DEDDh_C
Other DBs
NCBI-ProteinID: AEH32060
LinkDB
Position
I:complement(501767..502441)
AA seq 224 aa
MAITIKFANSGGEQLNWFTRHYWFHKLKDSPYQPLFATPMQGEYVSLDCETTSLDPNRAE
LVTIAATKIIDNRILTSQPFEVRLSAPQSLDSGSVKIHKIRHQDLVDGIDEQEAITHLLD
FIGNRPLVGYHIRYDKKILDLACRRHLGFPLPNALIEVSQIYHDQLERMLPNAYIDLSLE
AICRHLDLPMQDKHDALQDAIAAALVFVRLTKGDLPPFVAPYSR
NT seq 675 nt   +upstreamnt  +downstreamnt
ttggctatcactatcaaattcgcgaatagtggaggcgaacaattgaattggtttacacgc
cattattggtttcacaagctgaaagactcgccttatcagccgttgtttgcgacgccgatg
caaggggaatatgtgtcgctcgattgcgaaaccaccagccttgacccgaatcgcgccgag
ttagtgacgattgccgccaccaaaatcatcgacaaccgcattttaaccagccagccattt
gaagtgcgtttgagcgcgccacaatcgctcgactcgggttcagtcaaaatccacaaaatt
cgccatcaagatctggtcgatggcatcgacgagcaagaggccatcactcacctattagac
tttatcggcaaccgacctttagtgggctatcacattcgttatgacaaaaaaatcctcgac
ctcgcttgtcggcgacatttaggctttccactgcccaatgctctcatcgaagtaagtcag
atctatcatgatcagttagagagaatgctgccgaacgcgtacatcgacctcagcttagag
gcgatttgtcgccatctcgacttgccgatgcaagataaacacgacgcgctgcaagatgct
atcgccgcggcattagtgtttgtgcgcttgaccaaaggtgatctgcctccctttgttgca
ccttactcgcgctag

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