Vibrio anguillarum 775: VAA_02586
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Entry
VAA_02586 CDS
T01536
Name
(GenBank) Primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
van
Vibrio anguillarum 775
Pathway
van03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
VAA_02586
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
van03400
]
VAA_02586
Enzymes [BR:
van01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
VAA_02586
DNA repair and recombination proteins [BR:
van03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
VAA_02586
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
PriA-like_WH
Zot
AAA_19
cobW
AAA_11
Zn_ribbon_6
TrwB_AAD_bind
DUF1258
HypA
Motif
Other DBs
NCBI-ProteinID:
AEH32098
LinkDB
All DBs
Position
I:544512..546713
Genome browser
AA seq
733 aa
AA seq
DB search
MRPTIARVALPVPLDKQFDYQIPSHLFPIVGGRVSVPFGRQTLVGIVTAIVSESEFSVDQ
LKPLKAVLDSQPVWPEKLYQLLLWCSQFYQYPLGDTLFNALPGALRKGKAADFSTLVEWQ
LTPSGRDQLMQGFGRAVKQAKVMTMLESGAVPHQLFIDEEVGSSVLKTLQEKGWIESLEK
RPTLTAWPQNVEADVEKPKLNQEQAIAIASINSHHHFACYLLEGVTGSGKTEVYLNLIKP
VLEKGRQALVLVPEIGLTPQTINRFRKRFNVPVAVVHSGLNETERLNAWLAARDNIAGII
IGTRSALLTPFADLGIIIVDEEHDASYKQQDSLRYHARDVAVMRANLEQIPIVLGSATPA
LETLHNALSGKYHHLSLTQRAGVAVPTKNKVLDVKGLFLESGLSAPLIAEMRKHLSAGNQ
VMLFLNRRGFSPALMCHECGWIAECKRCDAYYTFHQYSSDMRCHHCGSQRPVVHQCQGCG
STQLVTVGVGTEQLEAQLAQLFPEYKTVRIDRDSTRRKGSLESALSSIRQGEYQILIGTQ
MLAKGHHFPDVTLVALLDVDGSLYSSDFRAAERLAQLFTQVAGRAGRASKPGEVILQTHH
PEHSLLQALLQKDYRHFAETALEERKIAMLPPYTYLTLFKAESNQASMVEEFLRQIRHTL
EAHPLFDDSCLVLGPTPAPLAKRAGKYRWQLLLQTQHRSKMQKLLMSAKPAIGLLPLAKK
IRWSLDIEPQDLS
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccaccattgcacgcgttgccttacctgtcccattggataagcagtttgattat
cagatcccaagtcatctgtttccgattgttggtggacgagtgtcggtgccatttggtcgg
caaactctggtgggtatcgtcaccgctatagtcagtgaatctgagttttcagtcgatcaa
ttaaagccgctaaaagcggtgctcgatagccagccagtctggccagagaaactctatcaa
ttgctgttgtggtgtagccaattttatcaatacccattaggagacacgctatttaatgcc
ttgcctggcgcattacgcaaagggaaagcggccgatttttcgaccttagtggagtggcaa
ctgacgcccagtgggcgcgatcaactcatgcaaggattcgggcgagcggtaaagcaagcc
aaagtgatgacgatgctggagtctggcgctgtgccccatcaactgtttattgatgaagag
gtaggtagcagcgtactcaaaaccttacaagagaaaggctggatagaatcactggaaaaa
cggccgacactgacggcttggccgcaaaatgttgaagcggatgtggaaaagcccaagctc
aaccaagaacaagcgatcgcgattgcttcaattaatagccatcatcattttgcatgctat
ttacttgaaggggtcaccggttcagggaaaaccgaagtttatctaaacttaatcaagccc
gttttagaaaaaggacgtcaggcattggtactggtgcctgagattggtctaacaccacaa
accattaaccgctttcgtaagcgatttaatgtgccagttgccgtggtccactcggggctc
aatgaaaccgagcgcctcaacgcgtggttagcggcgcgtgataatatcgcgggcattatt
attggtactcgctcagcgctgctaacgccttttgcagacctaggtatcatcattgttgat
gaagagcacgacgcttcgtataaacagcaagatagcctacgctaccatgcaagagatgtc
gcggtaatgcgtgcaaatcttgagcagatcccgattgtgctcggttctgccactccagca
ttagaaacgttgcataatgcattgagtggcaaatatcatcacttaagcttaactcagcgt
gcgggcgtagcggttcccactaaaaacaaagtgttggatgtgaaaggcctgtttttagag
agtggtttatcagcgccgctgattgctgagatgagaaaacacctcagcgctggtaaccaa
gtgatgctgtttctcaatcggcgcggcttctcgcctgcgctgatgtgccatgaatgcggt
tggattgcagaatgcaaacgttgcgatgcgtactatacctttcaccaatacagcagtgac
atgcgttgtcaccattgtggctcgcaacgtccggtggttcatcagtgtcaaggttgtggt
tcaactcagttggttacggttggggtaggtaccgagcaacttgaagcgcaactggcgcag
cttttccccgaatataaaacggtgcgtattgatcgcgatagtacgcgtcgtaaaggcagt
ttagaaagtgcattatcatcgattcgccaaggtgagtatcagattttaattggcacgcag
atgctcgctaaagggcaccatttccccgatgtgactttagtagcgttattggatgtggat
ggttcgctatacagcagtgattttcgcgccgccgaacgcttggcgcagctatttactcaa
gtggcaggtcgagcaggacgcgctagtaaacccggcgaagtcattttacaaacgcatcac
ccggaacacagtttgctgcaagcactgttgcaaaaggattatcgtcattttgcagaaacc
gcgttagaagagcggaaaatagcgatgttgccaccttacacctatctcacactgtttaaa
gcggaatccaatcaagcttcgatggtggaagagtttttacgccaaattaggcatacgtta
gaagcgcatccgttatttgatgattcgtgcttagtcttagggccaactccagccccattg
gcgaaaagagcgggcaaatatcgctggcagttattactgcaaactcaacatcgctccaaa
atgcaaaaactattgatgagtgctaagcctgcgattggactgttaccattagccaagaaa
attcgctggtcgttagatattgaaccgcaagatctcagttaa
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