Vibrio anguillarum 775: VAA_02601
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Entry
VAA_02601 CDS
T01536
Name
(GenBank) 60 kDa chaperonin GROEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
van
Vibrio anguillarum 775
Pathway
van03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
van00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
VAA_02601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
van03019
]
VAA_02601
03110 Chaperones and folding catalysts [BR:
van03110
]
VAA_02601
03029 Mitochondrial biogenesis [BR:
van03029
]
VAA_02601
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
van04147
]
VAA_02601
Enzymes [BR:
van01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
VAA_02601
Messenger RNA biogenesis [BR:
van03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
VAA_02601
Chaperones and folding catalysts [BR:
van03110
]
Heat shock proteins
HSP60 / Chaperonin
VAA_02601
Mitochondrial biogenesis [BR:
van03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
VAA_02601
Exosome [BR:
van04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
VAA_02601
Exosomal proteins of other body fluids (saliva and urine)
VAA_02601
Exosomal proteins of breast cancer cells
VAA_02601
Exosomal proteins of colorectal cancer cells
VAA_02601
Exosomal proteins of bladder cancer cells
VAA_02601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
DHC_N2
Motif
Other DBs
NCBI-ProteinID:
AEH32112
LinkDB
All DBs
Position
I:557572..559206
Genome browser
AA seq
544 aa
AA seq
DB search
MAAKDVKFGNDARIKMLEGVNILADAVKVTLGPKGRNVVIDKSFGSPIITKDGVTVAREI
ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVVAAVEALKELSVPCSDTKAIAQVGTISANSDSSVGNIIAEAMEKVGRDGVITVEEG
QALQDELDVVEGMQFDRGYLSPYFINNQEAGSVDLDSPFILLVDKKISNIRELLPALEAV
AKASRPLLIVAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGLELEKVTLEDLGQAKRISITKENTTIIDGAGEEQAIKGRVAQIRQQIEDATSDY
DKEKLQERVAKLAGGVAVIKVGATTEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI
RAAAKVAGLEGDNEEQNVGIRVALRAMEAPIRQIVKNAGEEDSVVANNVRAGEGNYGYNA
ATGEYGDMIDMGILDPTKVTRSALQFAASVAGLMITTEAMVTELPKKEAAMPDMGGMGGM
GGMM
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgttaaatttggtaacgatgcacgtattaaaatgctagaaggcgtt
aatattctagccgatgcagtaaaagtcacccttggccctaaaggccgtaacgttgtgata
gataaatcgtttggttcacctattatcaccaaagatggtgtcactgttgcgcgtgaaatt
gaactggaagacaaattccagaacatgggtgcacaaatggtgaaagaagttgcttctcaa
gctaacgatgcagcgggtgacggaacgacaaccgcaacggtattagcgcaagcgatcatc
actgaaggcttgaaagctgtagcagcgggtatgaacccaatggatcttaagcgtggcatc
gacaaagctgtcgtggcggcggttgaagcgttgaaagagctttcagtaccttgttcagac
actaaagcgattgcgcaagtgggtactatttctgcgaactcggattcaagcgtgggtaac
atcattgctgaagcgatggaaaaagtgggccgagatggcgttatcactgttgaagaaggt
caagcactgcaagatgaactcgatgtagtggaaggtatgcagtttgatcgtggttaccta
tctccttacttcattaataaccaagaagcgggcagtgttgatctagatagcccattcatc
ctattggttgataagaaaatttctaacattcgcgaactgcttcctgcacttgaagcggta
gcaaaagcttctcgtccactactgattgtggcggaagatgttgaaggtgaagcattggcg
acgctggttgtgaacaacatgcgtggcattgtaaaagttgctgccgtgaaagcacctggt
tttggtgatcgccgtaaagcgatgctacaagacattgctaccctaacgggcggtactgtg
atttctgaagagatcggtcttgagcttgaaaaagtgaccttggaagatctaggccaagcg
aagcgcatctctatcactaaagaaaacaccaccatcattgatggtgcaggtgaagagcaa
gccattaaaggtcgcgttgcacaaattcgtcaacaaattgaagacgcaacttcagattac
gacaaagaaaaactacaagagcgcgtggccaaactggcaggtggcgttgcagtgatcaaa
gtcggtgcaaccactgaagttgaaatgaaagagaagaaagatcgcgtagaagatgcactg
catgcaactcgcgcagccgttgaagaaggcgtggttgcgggtggtggtgttgcactgatc
cgtgcggctgctaaagttgcgggccttgaaggtgacaacgaagagcaaaacgtaggtatt
cgtgttgcactacgtgcgatggaagcaccaattcgtcaaatcgtgaaaaacgcgggcgaa
gaggattctgttgtggctaacaatgttcgcgctggtgaaggtaactatggttacaacgct
gcgacgggtgaatatggcgatatgatcgacatgggtattttggatccaaccaaagtgact
cgtagtgcgctacagttcgcagcttcagtcgcgggccttatgatcaccacagaagctatg
gtgactgagctaccgaagaaagaagcggcaatgcctgatatgggcggcatgggcggtatg
ggagggatgatgtaa
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