Vibrio anguillarum 775: VAA_02739
Help
Entry
VAA_02739 CDS
T01536
Name
(GenBank) RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
van
Vibrio anguillarum 775
Pathway
van02020
Two-component system
van02040
Flagellar assembly
van05111
Biofilm formation - Vibrio cholerae
Brite
KEGG Orthology (KO) [BR:
van00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
VAA_02739
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
VAA_02739
09142 Cell motility
02040 Flagellar assembly
VAA_02739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
van03021
]
VAA_02739
Transcription machinery [BR:
van03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
VAA_02739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_21
Motif
Other DBs
NCBI-ProteinID:
AEH32249
LinkDB
All DBs
Position
I:complement(685329..686789)
Genome browser
AA seq
486 aa
AA seq
DB search
MKPSLQLKLGQQLAMTPQLQQAIRLLQLSTLELQQEIQEALESNPLLDVEEAYEENATAD
VHSINEEKEASAEVLDIEPQDSSDLIEKSEISSELEIDTTWDDVYSANTGSTGIALDDDM
PVYQGETTQTLQDYLLWQLDLTPFSDTDRSIALALIDAIDDYGYLTVSLDDILESFADEN
IELDEIEAVRKRVQQFDPLGVASVNLQDCLLLQLATYPASTPWLEEAKQLLIQHIDLLGN
RDYKLIIKETKLKEEDLREVLQLIQQLDPRPGNNISTEHAEYVVPDVSVYKDHGKWVVTI
NPDSVPKLKINQQYAALGKGNSADSNYIRSNLQEAKWLIKSLESRNETLLKVAKCIVEHQ
RDFFEYGEEAMKPMVLNDVALAVEMHESTISRVTTQKYMHTPRGIFELKYFFSSHVSTDS
GGECSSTAIRALIKKLVAAENTAKPLSDSKIADLLADQGIQVARRTIAKYRESLGIAPSS
QRKRLL
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccctcattacaactgaagctcggccaacaattagcgatgacaccgcagttacaa
caagccattcgtttgttgcaactctccacattggaactccagcaagagatccaagaggct
ctagagtctaatccattattggatgttgaagaggcctatgaagagaatgccaccgctgat
gttcatagcatcaatgaggagaaagaagccagtgctgaggtgttagatattgagccacaa
gacagctctgacttaattgaaaaatccgaaatcagcagcgagcttgagatcgacaccaca
tgggatgatgtctacagcgcgaacacaggcagcacagggatcgcccttgatgatgacatg
cccgtgtaccaaggtgaaacaacgcaaaccctgcaagattatctactgtggcaattagat
ctcacaccgtttagcgacaccgaccgcagcattgctcttgccttgattgacgccatcgat
gactacggttatctcaccgtttctttggatgatattttagaaagctttgccgatgaaaat
atcgagcttgatgaaattgaagccgttcgtaaacgtgttcagcagtttgatcccctcggt
gtggcttcagtcaaccttcaagactgcctgcttttacaattagcgacctaccctgccagt
accccttggttagaagaagctaaacaactgctgatccaacatattgatctgctcggcaat
cgtgactacaagttgatcatcaaagaaaccaagttaaaagaagaagatctgcgagaggta
ttgcagctcattcaacaacttgacccaagaccgggaaataatatttcaacagagcacgcc
gaatacgttgtgcctgacgtgtctgtttacaaagatcacggcaaatgggtggtcacaata
aaccccgacagcgtaccaaaacttaaaataaatcaacaatatgcagcattaggcaaaggt
aacagtgccgatagcaactacattcgcagcaatttgcaagaagcaaaatggcttattaag
agtttagaaagtagaaacgagacactgctcaaagttgccaagtgtattgttgaacatcaa
cgtgatttctttgagtatggtgaagaggcgatgaagccaatggtactcaatgacgttgct
ttagcggtagaaatgcatgaatccaccatatcaagggtgacaacgcagaagtacatgcat
actccgcgtggtattttcgaattgaaatacttcttctccagccatgtcagtaccgacagc
gggggagagtgttcatcgactgcaatacgagcactgattaaaaaactggtggccgctgaa
aatacagccaaaccattaagtgacagtaaaattgcagatctactggctgaccaagggatt
caggtagctagacggacgatagctaaataccgtgaatcgttgggcattgctccatcgagt
cagcgcaaacgcctactgtaa
DBGET
integrated database retrieval system
