Vagococcus zengguangii: FA707_01280
Help
Entry
FA707_01280 CDS
T05965
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
vao
Vagococcus zengguangii
Pathway
vao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FA707_01280 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vao03019
]
FA707_01280 (recQ)
03400 DNA repair and recombination proteins [BR:
vao03400
]
FA707_01280 (recQ)
Enzymes [BR:
vao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FA707_01280 (recQ)
Messenger RNA biogenesis [BR:
vao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FA707_01280 (recQ)
DNA repair and recombination proteins [BR:
vao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FA707_01280 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
RQC
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
QCI85683
UniProt:
A0A4D7CRP5
LinkDB
All DBs
Position
257693..259519
Genome browser
AA seq
608 aa
AA seq
DB search
MEQAVNILSSVFGYETFRQGQTEVIETIANQQDVLAIMPTGSGKSLCYQIPALMAEGITI
VVSPLVSLMKDQVRELLAAGIRGAYINSSLSEAQINKALFNLSQGMYKIVYVAPERLMTP
RFLAAVSEVPVSLIAVDEAHCLSQWGHDFRSSYLAIPEFIATFEARPTIAAFTATANVKT
QHDILAYLGLQEPLIVKNSYDRPNLYFAVEVVANRRKFVEYYVQKNPGESTVIYASTRKE
VEKIANFLVELGVKATYYHAGLSSDERTRHQDAFIFGEADVIVATNAFGMGINKPDVRHV
IHYNLPKDLESYYQEAGRAGRDGEPAKCTLLFSRADIVLNRKMLVSSSEMYETSDEQQFY
KNKSLDAMVQYATTTSCLRRVMLNYFNEERSSDCDNCLNCQTTFEEREITEEARAVMHYL
AELQQAHRQIGKERVIQSLMMAESDASPINSDWLGSLADKTKLEVTEVMDYLLDHYFISM
DVLNYYVLSLTERGQAWLMEETPLMMPLRKKTAYQALKNEKKSKKTSELVISADNQSLYN
RLADLRKELAQEQNLPAYVVFGNKSLAEMATYQPQTKEAFLAIKGVGESKYETYGEVFIQ
AIQAYLAD
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atggaacaagcagtaaacatattgtccagtgtttttggatatgagacgtttcgtcaggga
caaaccgaggtaattgaaacgattgccaatcaacaagatgttttagcgattatgccaacc
ggttcaggaaagtcgctttgttatcaaattccagcgctgatggctgaagggattacgatt
gttgtttcgccacttgtttcattaatgaaagatcaagtgcgtgagttgcttgcagcaggt
attcgaggtgcctatattaattcgtcgctaagtgaagcacaaatcaataaagccttgttt
aatttgagtcaggggatgtacaaaattgtctatgtggcgcctgaacgtttaatgacacca
cgctttttagcggcggttagtgaagtgcctgttagtttaatcgcagttgatgaagcgcat
tgcttatcgcaatgggggcatgactttaggagtagctatttagcgattccagaatttatt
gccacttttgaagcacgtccaacgattgcggcgtttactgcaacagctaatgtcaaaacg
cagcacgatattttagcatatctgggattacaagagccacttattgtaaaaaatagttat
gatcgtcctaacttatatttcgcagtcgaagttgtggcaaatcgtcgaaaatttgttgag
tattacgttcagaaaaatccaggtgaaagtacggtcatttatgcctcaacgcgtaaagaa
gtcgaaaagatcgctaatttcctagttgagttaggggtcaaagcgacctattatcatgcg
ggtttatcaagtgacgaacgcacacgtcatcaagatgcgtttatttttggcgaagcggat
gtgattgtggcaacgaatgcttttggaatggggattaacaaacccgatgtgcgtcacgtc
attcactataacttaccaaaagacttggagagttactatcaggaagcaggtcgagcgggt
cgcgatggggaaccggccaagtgtaccttgttattttcacgtgcggatatcgtgttgaat
cgtaaaatgttagtgtctagttctgaaatgtatgaaacaagtgacgagcaacaattttat
aaaaataaatcccttgatgcgatggtacagtatgcaacgacaactagttgtttacgtcga
gtgatgctaaattattttaatgaagagaggtcgagtgactgtgataattgtttgaactgt
cagacgacgtttgaagaaagagagattaccgaagaagcacgggctgtgatgcactatttg
gcagaactacaacaagcgcatcgtcaaattggtaaggaacgtgtgattcaatcgttgatg
atggctgaaagtgacgcatcccctatcaattcagattggctaggcagtttggccgacaaa
accaaattagaagtgacggaagtgatggattatttattagaccattattttatttcaatg
gacgtcctgaactattatgtgctaagtttgacggagagaggtcaagcgtggttgatggaa
gaaacaccgttaatgatgcctttgcgtaaaaaaacagcctatcaagcattaaaaaacgag
aagaaaagtaaaaaaacaagtgaacttgttatttcagccgataatcagtccttatataac
cgtttagctgatttacgtaaagaattagcccaagaacaaaacttaccggcttacgtggtg
tttggaaataagagtttagctgagatggcaacttatcagccacaaacgaaagaagccttt
ttagctattaaaggagtcggtgaatcgaaatatgaaacatatggtgaagtgtttattcaa
gcgattcaagcttatttagctgactag
DBGET
integrated database retrieval system
