Vagococcus zengguangii: FA707_02355
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Entry
FA707_02355 CDS
T05965
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
vao
Vagococcus zengguangii
Pathway
vao03030
DNA replication
vao03430
Mismatch repair
vao03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
vao00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FA707_02355 (holB)
03430 Mismatch repair
FA707_02355 (holB)
03440 Homologous recombination
FA707_02355 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
vao03032
]
FA707_02355 (holB)
03400 DNA repair and recombination proteins [BR:
vao03400
]
FA707_02355 (holB)
Enzymes [BR:
vao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FA707_02355 (holB)
DNA replication proteins [BR:
vao03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FA707_02355 (holB)
DNA repair and recombination proteins [BR:
vao03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FA707_02355 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Scorpion_toxin_alpha-beta
Motif
Other DBs
NCBI-ProteinID:
QCI85876
UniProt:
A0A4D7CUI1
LinkDB
All DBs
Position
490666..491604
Genome browser
AA seq
312 aa
AA seq
DB search
MIDIQTKQPNIYRFFKKVLEKEQLVHAYLFEGGTGTGKLETAIWLAQCYFCEEATLACGH
CSDCLRIEEGNHPDVHLVEPDGQSIKIDQIAQIKSYFGKSGLERSKQFLMISQAEKMTIQ
AANSLLKFIEEPSGSLEIVFITENKERVISTIQSRCQVIFFEPLPKAVFRQSLIEEGVSE
SKVDILGNMTTDKKTVLALSDDEWFNELQEMVEKWLHYLIKRDAYSFVYVQQYLVRHCKD
KQQQAQCYQLLVAYLTLLIEGQKTSLFKELSRWSKAELANLTAEVLQAEQHWQANVSFQV
TLEQMVLHVLRK
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgatagacattcaaacaaagcaacctaatatatatcgtttttttaaaaaagttcttgaa
aaagaacaattagttcatgcctacttatttgaaggaggcaccggcactggtaaattggag
acagctatttggttagcacagtgctatttttgtgaagaagcaacgctagcttgtgggcat
tgttcggattgcttaagaatagaagaaggcaatcatcctgacgttcatttagtcgagcca
gatggtcaaagcattaaaatcgatcaaatagctcaaattaaatcgtattttggaaaaagc
gggttagaacgttcaaaacagtttttaatgatttctcaagctgaaaaaatgacgattcaa
gcggcgaatagtttgttgaagttcattgaagaaccaagtggctcattagaaatcgtattt
attaccgagaataaagagcgtgttatttcaaccattcaatcacgttgtcaggtgattttc
tttgaaccattaccaaaagctgtttttcgacaatccttgattgaagaaggtgtcagtgag
tctaaagtcgacatcctcggcaatatgaccactgataaaaaaacagtgcttgcattatca
gacgatgagtggttcaatgaattacaagagatggtagaaaagtggttacattatttgatt
aaacgggacgcctatagttttgtctatgttcagcaatatttggtccgtcattgtaaagat
aaacagcaacaagcgcagtgttatcaactgttagttgcctatttaacgttactaattgaa
ggacaaaaaacatcgctatttaaagaattaagtaggtggtcaaaagctgagttagctaat
ttgactgcggaagtgttacaagctgaacagcattggcaagcaaatgtttcttttcaagta
acgttagagcaaatggtattacatgtcttaagaaaatga
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