KEGG   Vagococcus zengguangii: FA707_03895
Entry
FA707_03895       CDS       T05965                                 
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
  KO
K03702  excinuclease ABC subunit B
Organism
vao  Vagococcus zengguangii
Pathway
vao03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:vao00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    FA707_03895 (uvrB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:vao03400]
    FA707_03895 (uvrB)
DNA repair and recombination proteins [BR:vao03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     FA707_03895 (uvrB)
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      FA707_03895 (uvrB)
SSDB
Motif
Pfam: UvrB_inter UvrB_3rd UvrB Helicase_C ResIII UVR DEAD AAA_7 AAA_19 TrwB_AAD_bind AAA AAA_22 AAA_30 Oxidored_nitro
Other DBs
NCBI-ProteinID: QCI86154
UniProt: A0A4D7CT22
LinkDB
Position
816721..818715
AA seq 664 aa
MIERQTDIDFDLVSKYQPNGDQPAAISRLVDNLNHHVKEQILLGATGTGKTFTISNVIKE
VKKPTLVIAHNKTLAGQLYSELKEFFPNNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSV
NDEIDKLRHSATSSLLERNDVIVVASVSCIYGLGDPNEYRKKVLSLRVGAEMEHSELLRR
LVAIQFERNDIDFQRGRFRVRGDVVEIFPASRDERALRIEFFGDEIERIREVDALTGEII
SDREHVAVFPATHFVTDENDMEESIKKIEAELEERLAVLRKEEKLLEAQRLEQRTNYDIE
MIREMGYCSGIENYSRHMDGRKEGEPPYTLIDFFPDDFLIVADESHVSLPQIRGMYNGDR
ARKQMLVDYGFRLPSALDNRPLRLEEFEERVNEIIYVSATPGPYEMERTDHVIEQIIRPT
GLLDPVIEVRPIMGQIDDLVGEINERIEKNERVFITTLTKKMSEDLTDYLKELGIKVKYL
HSDIKTLERTEIIRDLRLGEFDVLVGINLLREGLDVPEVSLVAILDADKEGFLRSERSLI
QTIGRAARNSEGKVIMYADKVTDSMQKAIDETARRRGIQMAYNEEHGIVPKTIIKEIRDL
ISITKAAEDVETVDAVNSYQALSKQEKREVILKLEKEMRDAAKALDFERAATLRDTVLEL
KGDL
NT seq 1995 nt   +upstreamnt  +downstreamnt
atgatagagcgacaaactgatatcgattttgatttagtgtcaaaatatcagcctaatggg
gatcagccggcagcgattagtcgtttagttgataaccttaatcaccatgtaaaagaacaa
attttacttggcgcaacagggactggtaagacctttacaatttctaatgtaatcaaagaa
gtgaagaaaccgaccttggtaattgcgcataataaaacattagcagggcagttatatagt
gaattaaaagaatttttcccaaataatgcggtcgaatattttgttagttattatgattac
tatcaaccagaagcgtatgtgccttctagtgacacgtatattgagaaagattcaagcgtc
aatgatgagattgataaattgcgacattcagcgacaagttcattgttagaacgtaacgat
gtaattgtggtggcgtctgtttcctgtatttatgggttaggggatccaaatgaatatcgt
aaaaaagtgttatctttacgtgtcggagccgagatggaacatagtgaattgttacgtcga
ttagtggccatacaatttgaacgtaatgatattgatttccaacgaggtcgcttccgtgta
cgaggcgatgtcgtcgaaattttcccagcatcacgtgacgaacgcgcgttaagaattgaa
tttttcggcgatgaaattgagcggattcgtgaagtcgatgccttaacgggtgaaatcatt
tccgaccgtgagcatgttgctgttttcccggcaacccactttgtgaccgatgaaaatgac
atggaagagtctatcaagaagattgaagctgagttagaagagcgcttagctgtactgcgt
aaagaagagaaattattggaagcccaacgtttagaacaacggacgaactacgacatcgaa
atgattcgtgagatgggatactgttcagggattgaaaactattcacgtcatatggacggt
cgtaaagaaggtgaaccaccgtatacgctaatcgatttcttccctgatgatttcttaatt
gtggcggatgaatcacatgtgtcgctaccacagattcgcgggatgtataacggtgaccgt
gcgcgtaaacaaatgttagtcgattatggcttccgtttaccaagtgccttagataatcgt
ccactgcgtttggaagaatttgaagagcgtgttaatgaaattatttatgtttcagccaca
cctgggccgtatgaaatggaacgtactgatcatgtaattgaacaaattattcgtccaaca
ggtttgttagatcccgtcattgaagttcgtccaattatgggacaaattgatgatttagtt
ggtgaaatcaatgaacgcattgagaagaatgaacgggtatttatcacgacgttaacgaaa
aaaatgtcagaagatttaaccgattatttgaaagaattaggtatcaaagtaaaatactta
catagtgatatcaagacactcgagcggaccgaaattattcgtgatttgcgcttaggtgaa
tttgatgttttagttgggataaacttgctgcgtgaagggctagatgtgccggaagtatca
ttagtcgcgattttagatgccgataaagaaggtttcttgcgaagtgaacgttcgttaatt
caaacaattggtcgggcagcgcgtaactcagaaggtaaagtgattatgtacgctgataaa
gtaaccgattctatgcaaaaagcaatcgatgaaacagctcgtcgtcgtggaatccaaatg
gcctacaatgaagaacacggaattgtaccgaagacgattattaaagaaattcgtgattta
attagtatcacgaaagccgccgaagatgtcgaaactgtcgatgcggttaactcatatcaa
gcgttaagcaaacaagaaaaacgtgaagtcattctaaaacttgaaaaagaaatgcgcgat
gccgctaaagcattagactttgaacgggcagccactttacgtgatactgttttagaatta
aaaggtgatttatag

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