Vagococcus zengguangii: FA707_04275
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Entry
FA707_04275 CDS
T05965
Name
(GenBank) ATP-dependent helicase
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
vao
Vagococcus zengguangii
Brite
KEGG Orthology (KO) [BR:
vao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vao03400
]
FA707_04275
Enzymes [BR:
vao01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FA707_04275
DNA repair and recombination proteins [BR:
vao03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
FA707_04275
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
UvrD_C
LisH_WDR26
Motif
Other DBs
NCBI-ProteinID:
QCI86225
UniProt:
A0A4D7CPZ5
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All DBs
Position
905876..909430
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AA seq
1184 aa
AA seq
DB search
MSVKFFYGTASAHHDEVLIEEAGKWLASGVQRRVFYLVPNHVKFETEVNVLHQMSKQNQT
KVMGTLSLQVFSFSRLAWYFLQNTAYYQSNSLSKTGKHMVIKTILEEEKESLTVYQGEVN
QTGFVEQVASFIDELLQANIQAADLAQIHQRLTVDQKDLQLKLTDIERIYGRYQAYLQEH
KIEEDQLLVNLSEYLVAEDLSDTLFIVTGFTRFTSQEQQLIQSLMKQAGNVWFDLVLDQA
AVDKMPAAHNLFYDSGKLYHQLYHLARQANIPVEFDQKTNNQRNPDLLALDNYWAESQQP
TGKKIETKLQDNQTLSIWKAENPQAEVEHVGREIRRLVAQEGYRYKDIEVLYRDETNYSP
RFAPVFNGLQIPFYFDETQTMKHHPLVEFLEALFSIDERYFRYQDIMRFLRTELFLPNDD
GNSTQSEWLANRLAYREAVDVTENVMLAYGYEGGHWTREEDWHYINYISEEGQPETRDQQ
IERQSNQVRRELRDCLVPFFEQLNQASLGKDAALCLYQFLVAIGVERQMIVWRDYYLSQG
KLEEAKIHEQSWQAFIHLLDEYVDILGERPFDKAEFVRLLMFGLEDFEYGKVPTTLDQVK
ISVLDKVHAKKNKVTFIIGATDQVLPAKLENTTIFSDDERVLIDEQLNEEQFLLPSNSQS
IMKEPFVAYLAFLSTEERLYLTYPLSGEKGTVGKISPYVLRLAKAFDLEIQEKLLMPASE
CFDLSFVGTDESFIEMSVRLHRQALDFKSSLASGWQQLHERLLKNGAPILTQRYRNVMKS
LTHKNIPETLQPATVEKLYGDTLYGSVSRIEKFYQCEYKYFMTYGLRLKEREVFDLTPAT
AGELFHEALDLIFKELINSQKTLADLTEAEIMSLSETILQQLFEERKYMILSASSRMNYI
KYQLSQTIKRVAWALKRQSERTGMSIFKTEVLFGEIAKEKGYQSLTVALDNQKQMKISGK
IDRLDRFVDTKTGQNYLSVVDYKSSEHRFNFEDAYEGLAMQMITYLDVALQNAVSLVGEE
AVKPAGAFYLHIQNPRLKAPIKQDVLDEKLLTEFKYKGLLLEDEALLEGLDVSLEPMKAS
AVYDLKQLKSGKLSSAQTLEQSDFDALITHNRQLFKEAGEKIYDGEVNLNPAYRKKVRIA
CGHCPFRSVCQFDPMLKENNYHRLETLKKDEVIARLKIDQKEAE
NT seq
3555 nt
NT seq
+upstream
nt +downstream
nt
atgtcagtaaagtttttttatggtacggcgagtgcgcaccacgatgaagtcttaattgaa
gaggcaggtaaatggttagcaagcggcgttcaacgacgtgttttttatttagttcctaac
cacgttaaatttgagactgaggtaaatgttttgcaccaaatgtctaaacaaaaccaaacg
aaggtgatgggaactttatcacttcaagtatttagtttctcacgtttggcgtggtatttt
ttgcaaaatacagcctattatcaatccaatagtttgagtaaaacaggcaaacatatggtt
ataaaaaccattctagaagaagaaaaagaatcgttgacggtttatcaaggtgaagtcaat
cagacgggttttgttgagcaagtggcatcgtttattgatgagttgcttcaagccaatatc
caagcagctgatttagcacagattcaccaacgcttaacagtggaccaaaaagacttacag
ttgaaattaacagacatagaacgtatttatggacgttaccaagcctatttacaagaacat
aagattgaagaggatcaattattagttaatttatcggaatatttagtggcggaagattta
tctgataccttatttattgtgacaggatttacacgttttacatcacaagagcaacaatta
attcaatcgttaatgaaacaagcaggtaacgtttggtttgacttagttcttgatcaagcg
gccgttgataagatgccagctgctcataatctattttatgacagcggaaaattgtatcat
caattatatcatcttgctcgacaagcaaacattccagttgagttcgaccaaaaaaccaac
aatcaacgcaacccagacttgttagcgttggataattattgggcagaatctcaacaacct
actggtaaaaaaattgagacaaaattgcaagataatcaaacattatctatttggaaagct
gagaatccacaagctgaggtggaacacgttgggcgtgaaattcgacgattagtcgctcaa
gaaggctatcgttacaaggatattgaagtactatatcgcgacgaaactaattatagtcca
cgttttgctccagtgttcaatggcttgcaaattcccttttattttgatgaaactcaaacg
atgaagcatcatccacttgttgagtttttagaagcgttattttcaattgacgagcgctat
tttcgctatcaagacattatgcgcttcttaagaactgagttgtttttgccaaatgatgat
ggaaacagcacacaatctgagtggctagctaatcggttggcttatcgtgaagctgttgac
gtgaccgagaacgtaatgttggcatatggttatgaaggcggtcattggacacgtgaggaa
gactggcattatattaattacatcagtgaagaaggtcaaccggaaacccgtgatcaacaa
atcgaacgtcaatctaaccaagtacgtcgtgaattacgtgattgtctagtaccgttcttt
gagcaacttaatcaagcgagtttaggtaaggatgctgcattatgcttgtatcaatttttg
gtagcaattggggttgagcgtcaaatgattgtttggcgtgattactacttatcacaaggg
aaacttgaagaagctaaaattcatgaacaaagttggcaagcgttcattcacttattagac
gaatatgtggacatcttaggcgagcgtccgtttgataaagcagagtttgttcgtttatta
atgtttggcttagaagattttgaatacggtaaagtccccactacgctagatcaagtcaaa
atttcagtgcttgataaagttcacgccaagaaaaataaagtgacgtttattattggagca
actgatcaagtcttaccggctaaattagaaaacaccaccattttttctgatgatgagcgt
gtcttaattgacgaacaattaaatgaggaacagttcctattgccaagtaatagtcaaagt
atcatgaaggagccatttgtcgcctatctagctttcttatcaacggaagaacgtttgtat
ttaacgtatccattaagtggggaaaaaggcacagtcggtaaaatatcgccttacgtgcta
cgattagccaaagcgtttgatcttgagattcaggagaaactattgatgcccgctagtgaa
tgctttgatttatcgtttgttggaacagatgaatcatttattgagatgtcagtgcgtttg
catcgtcaagcgttggatttcaagagttccctagcttccgggtggcaacaattgcacgaa
cgcttattaaaaaacggcgctcccattctaacccaacgttatcgtaatgttatgaaaagt
ttgacgcataaaaatattcccgagaccttacagccagcaactgtagaaaaattatatggt
gatacgttgtacggatcagtttctcgaatcgagaagttttatcagtgtgagtataaatat
ttcatgacatatggtttacgtctgaaagagcgtgaagtcttcgatttaacgccagccaca
gcgggtgaattgtttcatgaggcacttgatttaattttcaaagaactcatcaattcgcaa
aaaacgttggctgatttgacagaggctgaaataatgtcgttatctgaaactattttgcaa
cagttatttgaagagcgtaagtacatgattttatcggcttcaagtcgtatgaattatatt
aagtaccaattaagccagactattaaacgtgtcgcgtgggccttgaaacgtcaaagtgaa
cgtacgggcatgagtatttttaaaacggaagtgttatttggtgaaattgcgaaagaaaaa
ggttaccaaagtttaacggttgccttggataatcaaaaacaaatgaaaattagtggaaaa
attgaccgtttggatcgttttgtcgatactaagaccggtcagaactatctgagtgtcgtt
gactacaagtcgagtgaacatcgttttaattttgaagatgcgtatgaagggttagccatg
caaatgataacgtatttagatgttgccttgcaaaatgcggtgtcgctagtaggtgaagaa
gcggtgaaaccagctggcgctttctatcttcatatccaaaatccgcgactaaaagcgccg
attaagcaggatgtgctagatgagaaattattgacggaatttaagtataaaggcttatta
ttagaagatgaagccttacttgaagggttagatgttagcttagaaccgatgaaagcttcg
gccgtttatgatcttaaacaattgaaaagtggtaaactttcttcagcacaaacgctcgag
caatcggattttgatgcgttgattactcataatcgtcaattgtttaaagaagccggtgaa
aaaatttatgatggtgaagtgaatttgaatcccgcttatcgtaaaaaagtgcgtattgct
tgtggtcattgtccatttagaagtgtttgtcaatttgacccgatgttgaaagaaaataat
tatcatcgactagaaactttgaaaaaagacgaagtcattgcacgtctaaaaattgatcag
aaggaggcagaataa
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