Vagococcus zengguangii: FA707_07435
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Entry
FA707_07435 CDS
T05965
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
vao
Vagococcus zengguangii
Brite
KEGG Orthology (KO) [BR:
vao00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vao03019
]
FA707_07435
Messenger RNA biogenesis [BR:
vao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FA707_07435
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Ortholog
Paralog
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
LepB_GAP_N
Motif
Other DBs
NCBI-ProteinID:
QCI86805
UniProt:
A0A4D7CRK9
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All DBs
Position
complement(1564121..1565062)
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AA seq
313 aa
AA seq
DB search
MKKLKELTLDETFEIFVLLKNADVRVAKNGKKFIAFTFQDKSGTIDGKFWGASEDEISKF
TAGKVVLLGGKREAYQNAPQIKILNMRLATELEPNDPSLYMEAAPMTREAMEEEIQQVIF
DIQNATWNRIVRHLYTKYHEAFYEFPAAKRNHHAFSGGLAFHTLSMLRLAKGITHFYPEV
NQSLLYAGTLLHDLGKVIELSGSVSTEYTLAGNLLGHIVIIDEEITKTCEELKLDQMSED
VIVLKHMVLSHHGLLEYGSPVRPQIMEAEILHQLDNLDASIQMMLGALRSIEPGERTERI
FGLDNRNFYLPKC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaattaaaagaattaacattagatgaaacatttgaaatatttgtactattaaaa
aacgctgatgtacgtgttgcaaaaaatggtaagaagtttatcgcgtttacttttcaagat
aagtcaggcacgattgacgggaagttttggggagcaagtgaggatgaaatcagtaaattc
actgcaggaaaagtcgtccttttaggcggaaaacgcgaagcctatcaaaatgcaccacaa
attaaaattttgaatatgcgtttagcaacggagttagagccaaatgatccgagtttatat
atggaagcagctccgatgacacgtgaagcgatggaagaagaaattcaacaagtgattttt
gatattcaaaatgccacgtggaatcgcattgttcgtcatctttatacaaagtatcacgag
gccttttacgaatttccagccgcaaaacgtaatcatcatgccttttctggaggattggct
ttccatacgctatcaatgttgcgactggcaaaaggtatcacccatttttatccagaagtc
aatcaatcgttattgtacgcaggtacattattacatgatttaggaaaggtaatcgagctt
tcgggttcagtgagcactgaatatacgctagcaggtaatttactgggacatattgtcatt
attgatgaagagattacgaagacttgtgaggagttaaagttggatcaaatgtctgaagat
gtgattgtcttgaaacatatggtattgtcacatcatggcttgttagaatatggctcacca
gttaggccacaaattatggaagcggaaatcttgcatcaattagataatctggatgcgtca
attcagatgatgttaggagctttacgctcgattgaaccgggtgagagaacagaacgaatc
tttggtttggacaaccgaaatttctatttacccaaatgttaa
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