Vagococcus zengguangii: FA707_08170
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Entry
FA707_08170 CDS
T05965
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
vao
Vagococcus zengguangii
Pathway
vao03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
vao00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FA707_08170 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
vao03019
]
FA707_08170 (pnp)
03016 Transfer RNA biogenesis [BR:
vao03016
]
FA707_08170 (pnp)
Enzymes [BR:
vao01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
FA707_08170 (pnp)
Messenger RNA biogenesis [BR:
vao03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FA707_08170 (pnp)
Transfer RNA biogenesis [BR:
vao03016
]
Prokaryotic type
tRNA degradation factors
FA707_08170 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
OB_RRP5_4th
Bles03
KH-I_KHDC4-BBP
S1_2
Phage_TAC_10
Dockerin_1
Motif
Other DBs
NCBI-ProteinID:
QCI86941
UniProt:
A0A4D7CX35
LinkDB
All DBs
Position
complement(1734816..1736927)
Genome browser
AA seq
703 aa
AA seq
DB search
MSGKQVFTTTWGGRPLTVEVGQLAKQANGSVFVRYGDTVVLSAAVASKQAKDVDFFPLTV
NYEEKMYAVGKVPGGFIKREGRPSEHATLTARLIDRPIRPMFAEGFRNEVQITNVVMSVE
QDCPPDMAAMFGSSLALAISDIPFNGPIAGVNVGRVNGELIINPTPEQEEASDINLSVAG
TKDAINMVESGAKEVSEEAMLEALLFGHAAIKEMIAFQEEIVAAVGKEKMEVELLQVDAD
LKAEIVEAFNGRMIEAIQTEEKLAREDNIEAVKEEIIKVYTEKFADDEDAAKKLKQVKQI
AEDLEKDEVRRLITKEKIRPDGRQIDEIRPLAAEVGLLPRVHGSGLFTRGQTQALSTVTL
APLGEHQIIDGLGTEESKRFIHHYNFPQFSVGSTGPARSPGRREIGHGALGERAMAQVIP
SEEEFPYMIRVVSEVLESNGSSSQASICGGILALMDAGVPIKAPVAGIAMGLVMEGEDYT
VLTDIQGLEDHLGDMDFKVAGTEQGITALQMDIKIEGITEQILTEALSQAKKARMEILKV
ITAAIEAPREELSAYAPKIEMIQIKPEKIKEVIGKGGDTINGIIDETGVKIDIDQDGNVS
IASSDAAMIKRAIEIIEDIVREAKVGETYLAKVVRIEKFGAFVNLFKGKDALVHISQLAN
ERVANVEDVVKEGDEILVKVTEIDKQGRVNASRKAMLPKEDAK
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggaaaacaagtttttacaacaacatggggcggacgcccacttacagtcgaagtt
ggacaattagcgaaacaagctaacggttcggtgtttgtacgctacggagatactgtcgta
ctaagtgcagcagttgcttctaaacaagcaaaagatgtggatttcttcccactaactgta
aactatgaagaaaaaatgtacgcagttggtaaagtaccaggtggattcatcaagcgtgaa
ggacgtccaagcgaacacgcaacgttaacagctcgtttaatcgaccgtccaatccgtcca
atgtttgcggaaggtttccgtaacgaagtacaaatcactaacgttgttatgagtgtggaa
caagattgcccaccagatatggctgcgatgtttggttcatcattagcattagctatttca
gatattccattcaacggtccaatcgcaggggttaacgtcggtcgcgtgaacggggaatta
atcataaacccaacaccagaacaagaagaagcatcagatattaacttaagtgttgccgga
acaaaagatgccatcaacatggtggaaagtggcgcgaaagaagtgtcagaagaagcaatg
ttagaagcgttattattcggtcacgctgcgattaaagaaatgattgccttccaagaagaa
atcgttgccgctgttggtaaagaaaaaatggaagttgaattattacaagtcgatgctgac
ttaaaagctgaaatcgttgaagcttttaatggtcgcatgattgaagcaattcaaacagaa
gagaaattagcacgcgaagataacattgaagcggttaaagaagaaatcattaaagtttat
actgaaaaatttgcagacgacgaagacgctgcgaaaaaattaaaacaagtgaaacaaatc
gctgaagatttagaaaaagacgaagttcgtcgtttaattacgaaagaaaaaatccgtcca
gacggtcgtcaaatcgacgaaatccgtccgttagccgctgaagttgggttattaccacgc
gttcacggttcaggattatttactcgtggacaaacgcaagctttatcaacagttactcta
gcgccattaggtgagcaccaaattatcgatggtttaggaactgaagagagcaaacgtttc
atccatcactataacttcccacaattctcagttggttcaactggtccagcacgttctcca
ggacgtcgtgaaattggtcatggtgcgttaggtgaacgtgcaatggcacaagtaattcca
agtgaagaagagttcccatacatgatccgtgtggtttcagaagtattagaatcaaatggt
tcatcttcacaagcaagtatctgtggtggtatcttagcccttatggatgctggtgtgccg
attaaagcaccagttgccggtatcgcaatgggattagtaatggaaggtgaggactacaca
gtcttaacggatattcaaggtttagaagatcacttaggtgacatggactttaaagtagca
ggaactgaacaagggattactgcattacaaatggatattaagattgaaggaatcacagaa
caaatcttaacagaagctttatcacaagctaaaaaagcacgtatggaaatcttaaaagtg
attacagccgctattgaagcgcctcgtgaagaattaagtgcgtatgctcctaagattgaa
atgattcaaattaaacctgagaaaatcaaagaagttatcggtaaaggtggcgacacaatt
aacggtatcatcgatgaaacaggcgttaagattgatatcgatcaagatggtaacgtaagt
attgcgtcatctgatgctgcaatgattaaacgtgccattgaaattattgaagatatcgtt
cgtgaagcgaaagttggcgaaacttacctagctaaagttgttcgtatcgaaaaattcggt
gccttcgttaacttattcaaaggtaaagacgctttagttcatatctctcaattagctaac
gaacgtgtagctaacgttgaagatgtggtaaaagaaggcgacgaaattttagtcaaagta
acagaaatcgacaaacaaggtcgtgtgaatgcttctcgtaaagcaatgttaccaaaagaa
gacgcaaaataa
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