Variovorax paradoxus S110: Vapar_0024
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Entry
Vapar_0024 CDS
T00916
Name
(GenBank) penicillin-binding protein, 1A family
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00550
Peptidoglycan biosynthesis
vap01100
Metabolic pathways
vap01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Vapar_0024
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
Vapar_0024
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
vap01003
]
Vapar_0024
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Vapar_0024
Enzymes [BR:
vap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
Vapar_0024
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Vapar_0024
Glycosyltransferases [BR:
vap01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
Vapar_0024
Peptidoglycan biosynthesis and degradation proteins [BR:
vap01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
Vapar_0024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
PCB_OB
PycTM
Motif
Other DBs
NCBI-ProteinID:
ACS16687
UniProt:
C5CVY9
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All DBs
Position
1:25121..27529
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AA seq
802 aa
AA seq
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MDDSSPSAEPARSQRSVKLRRAARWSAIALGCGALVLLVAAVVAVASIYPRLPDISELAD
YRPKLPLRVYTVEGTLIGEFGEERRMLTPFASIPKVMKDAVLAVEDARFYDHGGVDYKGF
ARAAVASLKGGRKQGASTITMQVARNVYLSSERTLSRKAYEILLALRLEQQLSKDQILEI
YLNQIYLGNRAYGFAAASEAYFGKPLQNVTLAEAAMLAGLPKAPGANNPVANPRRARARQ
LYVIDRMHETGFITAEQAAEAKKEELHLRDAADPERLHAEYVAETVRQMMYAQYGDSIYT
SGMKVYTSLVAADQAAAYRSLRKGIMDYERRQPYRGPERFVDLPDDPKEVDEAVDDALAE
HPDNGDVMAAVVLEAGSKEINAVRANGETVQITGEGLRPAQSGLAAKAPPHIKIRRGAVI
RVARTPKNTWEITQLPEVEGAFIGMDPRSGAIKSLVGGFDFGKNKFNHVTQAWRQPGSSF
KPFIYSAALEKGFTPATIVNDAPLHFEPGTAGGQPWEPKNFDGGFEGPMPLRTALMKSKN
LVTVRLLQAIGAPYAQEWITRFGFDKDKHPAYLPMALGAGSVTPMQMATAYSVFANGGYK
VNPYLVTRITDLRDKVLVETEPPVLDESRRAIPERNAFIMDSLLQSVVKGGTAARAYQAL
KRDDLFGKTGTTNDSFDTWFAGFQPTTVGIAWIGYDTPRQLGVRGETGGSLSLPIWIGYM
QAALKGVPVSKMAEPPGVVNIDGEWYFDDFTPGHSVASLGVESEPPPVPAEELTGVPPAA
VPVPLGPPPQPEERNRILDFFR
NT seq
2409 nt
NT seq
+upstream
nt +downstream
nt
atggacgattcttctccctccgccgagcccgcgcgctcgcagcgttcagtgaagctgcgg
cgcgcggcgcggtggagcgccatcgcgctcggctgcggcgcgctggtgctgctggtggcc
gccgtcgttgcggtggcctccatctatccccggctgcccgacatttccgagctggccgac
taccggcccaagctgcccctgcgcgtgtacacggtcgaaggcacgctgatcggcgagttc
ggcgaagagcgccgcatgctcacgccctttgcgagcattcccaaggtcatgaaggacgcc
gtgctcgcggtggaagacgcgcgcttctacgaccacggcggcgtcgactacaagggcttc
gcgcgcgcggccgtggccagcctcaagggcggccgcaagcagggcgcctcgaccatcacg
atgcaggtggcgcgcaacgtctacctgagctccgaacgcacgctgagccgcaaggcctac
gagatattgctggcgctgcgcctggagcagcagctcagcaaggaccagatcctggagatc
tacctgaaccagatctacctgggcaaccgcgcctatggttttgccgccgcatcggaagcg
tatttcggcaagccgctacagaacgtcacgctggccgaagccgccatgctggccggcctg
cccaaggcgcccggcgccaacaacccggtggccaatccgcggcgcgcccgcgcccgccag
ctctacgtgatcgaccgcatgcacgaaaccggcttcatcaccgccgagcaggcggccgag
gccaagaaggaagagctgcacctgcgcgatgccgccgacccggagcggctgcatgcggaa
tacgtggccgagacggtgcgccagatgatgtacgcgcagtacggcgacagcatctatacc
agcggcatgaaggtctacacctcgctggtcgcggccgaccaggcggcggcctacaggtcg
ctgcgcaagggcatcatggactacgagcggcgccagccctatcgcgggcccgagcgcttc
gtcgacctgccggacgatcccaaggaagtcgacgaggcggtggacgacgcgctggccgag
catcccgacaacggcgacgtgatggccgcggtggtgctggaggccggcagcaaggaaatc
aacgcggtgcgcgcgaacggcgaaaccgtgcagatcaccggcgaaggcctccggcctgcg
cagtcgggccttgcggcgaaggcgccgccgcacatcaagatccgtcgcggcgcggtgatc
cgcgtggcccgcacgccgaagaacacctgggagatcacgcagctgcccgaagtggagggc
gccttcatcggcatggatccgcgcagcggcgccatcaagtcgctggtgggcggcttcgac
ttcggcaagaacaagttcaaccacgtgacgcaggcctggcgccagccgggctcgagcttc
aagcccttcatctattcggccgcgctcgaaaaaggcttcacgcccgcgaccatcgtcaac
gacgcgccgctgcacttcgagccgggcaccgcgggcggccagccctgggaaccgaagaac
ttcgatggcggcttcgaagggccgatgccgctgcgcaccgcgctcatgaagtcgaagaac
ctggtgacggtgcgcctgctgcaggccatcggcgcgccgtatgcgcaggagtggatcacc
cgcttcggcttcgacaaggacaagcacccggcctacctgccgatggcactgggcgccggt
tcggtcacgccgatgcagatggccacggcgtactcggtgttcgccaacggcggctacaag
gtcaatccgtacctcgtcacgcgcatcaccgacctgcgcgacaaggtgctggtcgagacc
gagccgccggtgctcgacgaaagccgccgcgccattcccgagcgcaacgccttcatcatg
gattcgctgttgcagagcgtggtgaagggcggcaccgccgcgcgcgcctaccaggcgctc
aagcgcgacgacctgttcggcaagaccggcaccaccaacgattccttcgacacctggttc
gcgggcttccagcccaccaccgtgggcattgcatggatcggctacgacacgccgcgccag
ctgggcgtgcgcggcgaaaccggcggcagcctgagcctgccgatctggatcggctacatg
caggccgcgctcaagggcgtgccggtcagcaagatggccgagccgccgggcgtcgtcaac
atcgacggcgagtggtacttcgacgacttcaccccaggccacagcgtggccagcctgggc
gtggagagcgagccgccgccggtgccggccgaagaactcacgggtgtgccgccggccgcc
gtcccggtgccgctgggcccgccgccgcagcccgaagagcgcaaccgcatcctcgatttc
ttccgctga
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