Variovorax paradoxus S110: Vapar_0061
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Entry
Vapar_0061 CDS
T00916
Name
(GenBank) transcriptional regulator, LysR family
KO
K13635
LysR family transcriptional regulator, cys regulon transcriptional activator
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
vap03000
]
Vapar_0061
Transcription factors [BR:
vap03000
]
Prokaryotic type
Helix-turn-helix
LysR family
Vapar_0061
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
HTH_24
PBP_like_2
SUKH-3
HTH_20
Motif
Other DBs
NCBI-ProteinID:
ACS16724
UniProt:
C5CW26
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All DBs
Position
1:complement(58525..59469)
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AA seq
314 aa
AA seq
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MNFQQLRSVREAVRCGFNLTEVAHTLHTSQPGVSRQIRELEEELGIELFVRAGKRLTGLT
EPGGHVLPIIERMLLESSNLRHAGQEFVAQQSGLLSVAATHSQARYAMPVAVQEFRAQFP
NVKLHLHQGSPKQIAQMLIDGEADVGIATEALGDYPQLVALPCYRWTHSVIVPPGHALLD
APLTLEALTRHPLITYDTGFTGRSRIDEAFAQRGLAPNIVLAAMDADVIKTYVQLGMGVG
IVAGVAYETERDTQLRALDAGRLFGINMTKLAVRRGNYLRKYVYAFIESFAPTLTRAVVE
KALGDEAKGSHYEI
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaacttccaacaactgcgctcggtacgcgaggccgttcgttgcggcttcaacctgacc
gaagtcgcccataccctccacacgtcccagccgggcgtgagccggcagatccgcgagctg
gaggaagagctcggcatcgagctcttcgtgcgcgccggcaagcgcctcaccggactcacc
gagccgggcggccacgtgctgccgatcatcgagcgcatgctgctggaaagcagcaacctg
cgccatgccgggcaggagttcgtcgcgcagcaaagcggcctgctctcggtggcggccacg
cattcgcaggcgcgctatgcgatgccggtggcggtgcaggaattccgcgcgcagtttccc
aacgtgaagctgcacctgcaccagggctcgcccaagcagatcgcgcagatgctgatcgac
ggcgaggccgacgtgggcattgccacggaggcgctgggcgactatccccagctggtggcc
ctgccctgctaccgctggacgcattcggtgatcgtgccgccgggccatgcgctgctcgat
gcgccgctgacgctcgaggcgctcacgcgccatccgctgatcacctacgacaccggcttc
accgggcgctcgcgcatcgacgaggcctttgcacagcgcgggctcgcgcccaacatcgtg
ctggccgcgatggacgccgacgtgatcaagacctacgtgcagctgggcatgggcgtgggc
atcgtggccggcgtggcctacgagacggagcgcgacacgcagctgcgcgcgctcgatgcg
ggccggctcttcggcatcaacatgaccaagctcgcggtgcggcgcggcaactacctgcgc
aagtacgtctacgccttcatcgaatcgttcgcacccacgctcacgcgcgcggtcgtcgaa
aaggctctgggcgatgaagcgaagggatcgcactacgaaatctag
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