Variovorax paradoxus S110: Vapar_0087
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Entry
Vapar_0087 CDS
T00916
Name
(GenBank) Extracellular ligand-binding receptor
KO
K01999
branched-chain amino acid transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_0087
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_0087
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_0087
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Phosphate and amino acid transporters
Branched-chain amino acid transporter
Vapar_0087
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_6
Peripla_BP_5
ANF_receptor
LppC
Motif
Other DBs
NCBI-ProteinID:
ACS16750
UniProt:
C5CW52
LinkDB
All DBs
Position
1:complement(84960..86144)
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AA seq
394 aa
AA seq
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MTPFTPVRTARLALTAIAFAALASAAGAQGSAKLKVGLMLPYSGTYTALGVAIENGFKLY
VDEHGGKLAGREIEYFKVDDESDPAKATDNVNKLIKRDNVDVIVGTVHSGVAMAMAKAAK
ESGTVLIVPNAGADAVTGPMCAPNIFRSSFSNWQPAFAMGEVAAKQQGKKKAMTITWKYA
AGDESVNGFKEGFEKNGGKVDKQLTLPFPNVEFQALLTEIAAAKPDAVYAFFAGGGAVKF
VKDYQAAGLNKTIPLYGPGFLTDGTLDAQGEAAQGMLTTLHYADGLNTARDNAFRVGYAK
AFKLQPDVYAVQGYDAAQMLGVGLAATKGDIGKKAEFTAAIEKAKIDSPRGTFTMSKSHN
PVQDIYLRKVEGKENKLVSIAIKGLTDPARGCRM
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgaccccattcaccccggttcgcactgcccgcctggccctcacagccatcgccttcgcc
gccctggccagcgccgccggcgcgcagggttcggccaagctcaaggtcggcctgatgctg
ccctacagcggcacctacaccgcgctgggcgtggccatcgagaacggcttcaagctctat
gtcgacgagcacggcggcaagctcgcgggccgcgagatcgaatacttcaaggtcgacgac
gagtccgacccggccaaggccaccgacaacgtcaacaagctcatcaagcgcgacaacgtc
gacgtgatcgtcggcaccgtgcactcgggcgtggccatggccatggccaaggccgccaag
gaaagcggcaccgtgctgatcgtgccgaacgcgggcgccgacgcggtcacaggcccgatg
tgcgcacccaacatcttccgcagttcgttcagcaactggcagccggccttcgcgatgggc
gaagtggcggccaagcagcagggcaagaagaaggcgatgaccatcacctggaagtacgcg
gcgggcgacgagtcggtcaacggcttcaaggaaggcttcgagaagaacggcggcaaggtc
gacaagcagctcacgctgccgtttcccaacgtcgagttccaggcgctcctgaccgagatc
gcggcggccaagcccgatgcggtgtatgccttcttcgcaggtggcggcgcggtgaagttc
gtcaaggactaccaggccgcgggcctgaacaagaccattccgctctacggcccgggcttc
ctgaccgacggcaccttggatgcgcagggcgaggccgcgcaaggcatgctgaccacgctg
cactatgccgacggcctcaacacggcgcgcgacaacgccttccgggtcggctacgccaag
gccttcaagctgcagcccgacgtgtatgccgtgcagggctacgacgcggcgcagatgctg
ggcgtgggcctggccgccaccaagggcgacatcggcaagaaggccgaattcacggccgcc
atcgagaaggcgaagatcgacagcccgcgcggcacgttcaccatgagcaagtcgcacaac
ccggtgcaggacatctacctgcgcaaggtggaaggcaaggagaacaagctggtgagcatc
gcgatcaagggcctcacggacccggcccgcggctgcaggatgtga
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