Variovorax paradoxus S110: Vapar_0145
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Entry
Vapar_0145 CDS
T00916
Name
(GenBank) transcriptional regulator, LysR family
Organism
vap
Variovorax paradoxus S110
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_30
Motif
Other DBs
NCBI-ProteinID:
ACS16808
UniProt:
C5CX04
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Position
1:complement(143283..144263)
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AA seq
326 aa
AA seq
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MDVNFRTLDLNLLRVFDEVMAERNLTRAARNLSITQPAVSNALRRLREVLGDELVRRSGA
GVEPTPRALALWPTVRDALRQLQHTLAPGEFDASTADTTFLLAMADATAAELIPGLVQIV
EKEAPAISLRVLPLTTRDPRRMLEQEEVDMAIGYFPAVIASLAARGQSGVGVAFETQRLY
LGQYVCVMRRGHPLANAPLTLDDYCAARHLLVSFSGRPYGFIDQTLGALGRERRIVVTVN
QFFTAGRVVANSDLLTVLPRHFVTVTGIDEQLVLRDLPFDQPMVHVDAIWHRRAQHGHAH
EWLRTALLRSAAAAFADSVLGQKVPG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcaacttccgcacactcgatctcaacctgcttcgcgtcttcgacgaagtgatg
gcggagcgcaacctcacgcgcgccgcgcgcaacctgtcgatcacccagcccgcggtgagc
aatgcgctgcgccgcctgcgcgaggtgctcggggacgagctggtgcgccgctccggcgcg
ggcgtggagcccacgccgcgcgcgctggcgctctggcccacggtgcgcgacgcgctgcgc
cagctgcagcacacgctggcgccgggcgagttcgacgcatcgactgccgacaccactttc
ctgctggccatggccgacgccaccgccgccgagctcattccggggctggtccagatcgtg
gagaaggaagcgcccgctatctcgctgcgcgtgctgccgctgaccacccgcgatccgcgg
cggatgctcgagcaggaggaagtcgacatggcgatcggctactttccggccgtgatcgcg
agcctggcggcgcgcgggcagtcgggggtgggcgtggccttcgagacccagcggctctac
ctggggcagtacgtctgcgtgatgcggcgcggccatccgctggccaatgcgccgctcaca
ctggacgactattgcgccgcgcggcatttgctcgtgagtttttcggggcgcccctacggc
ttcatcgaccagacgctgggcgcgctgggacgcgagcggcgcatcgtggtaaccgtgaac
cagttcttcacggccggccgggtggtggccaattcggacctgctcaccgtgctgccacgc
catttcgtgaccgtgaccggcatcgacgagcagctggtgctgcgcgacctgcccttcgac
cagccgatggtgcacgtcgatgccatctggcaccggcgcgcgcagcacgggcatgcgcac
gagtggctgcgcaccgcgctgctgcgctccgccgcggcggcttttgcggattcggtcctc
gggcagaaggtgcccggatga
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