KEGG   Variovorax paradoxus S110: Vapar_0196
Entry
Vapar_0196        CDS       T00916                                 
Name
(GenBank) virulence protein SciE type
  KO
K11898  type VI secretion system protein ImpE
Organism
vap  Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:vap00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:vap02044]
    Vapar_0196
Secretion system [BR:vap02044]
 Type VI secretion system
  Imp/Vas secretion system related proteins
   Vapar_0196
SSDB
Motif
Pfam: ImpE TPR_19 TPR_2 TPR_14 TPR_17
Other DBs
NCBI-ProteinID: ACS16859
UniProt: C5CX55
LinkDB
Position
1:203343..204209
AA seq 288 aa
MGDGFAVLGERSVAEHTEWVQRQIRASPQNAGLRLALGHFLALRGDWQRAEDQLKLAAKI
DPSFAPASATCAMALAAERHRTEFWSGGRAPAVVAGEAGWVAALIAAAALPPERDAEAAE
LREAARQDAPALQGTLSCVDRSDSRAVQAIDGEPVQSIEFAWLCDGDARMGAALELLTPS
GYAWLPLPAVRRLKFSRPQHLVDLLWAPAEIVLHDGRGLNGLVPVRYPGALEALDDETTL
GRRTDWLPLAGEDQYAGVGQRTLISEAGDHSLLDIRLVEFAPAESAAQ
NT seq 867 nt   +upstreamnt  +downstreamnt
atgggcgatgggtttgcagtgctgggcgagcgctccgtggccgaacacaccgaatgggta
cagcggcagattcgcgcgagtccacagaatgccggcctgcggcttgccctcggccacttt
cttgcgctgcggggcgactggcagcgggctgaagaccagctcaagctggccgcgaagatc
gatccttccttcgctcccgccagtgccacctgcgcaatggcgctggccgccgagcggcat
cgaaccgaattctggagcggcggccgtgcgccggccgtcgtggccggcgaggccggctgg
gtcgcggcgctgattgctgccgccgccctgccgcccgaacgcgacgccgaagcggccgag
ctgcgcgaagccgcgcggcaggatgcgcccgcattgcagggcacgctgagctgcgtcgac
cggtcggactcccgcgccgtgcaggccatcgacggcgagccggtgcaaagcattgagttc
gcctggctttgcgacggcgacgcgcgcatgggcgccgcgctcgagctcctcacgccttcg
ggctatgcgtggctgccgctgccggcggtgcgccgcctcaagttctcccgtccgcagcac
ctggtcgacctgctctgggcgccggccgagatcgtgctgcatgacggccgcgggctcaac
ggcctggtgccggtgcgctatcccggcgcgctcgaggcgctggacgacgaaacaaccctg
ggccgccgcaccgactggctgccgctggccggcgaggaccaatacgccggcgtgggccag
cgcacgctgatcagcgaagccggcgaccattcgctgctcgacatccggctggtcgagttc
gcgcctgccgagagtgctgcgcagtga

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