Variovorax paradoxus S110: Vapar_0213 Help Entry Vapar_0213        CDS       T00916                                  Name (GenBank) type VI secretion protein IcmF   KO K11891   type VI secretion system protein ImpL Organism vap  Variovorax paradoxus S110 Pathway vap03070   Bacterial secretion system Brite KEGG Orthology (KO) [BR:vap00001]  09130 Environmental Information Processing   09131 Membrane transport    03070 Bacterial secretion system     Vapar_0213  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    02044 Secretion system [BR:vap02044]     Vapar_0213 Secretion system [BR:vap02044]  Type VI secretion system   Imp/Vas secretion system core components    Vapar_0213 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  IcmF-related_N IcmF-related IcmF_C IcmF_helical DUF4381 Herpes_gp350_C Motif Other DBs NCBI-ProteinID:  ACS16876 UniProt:  C5CX72 LinkDB All DBs Position 1:224994..228629 Genome browser AA seq 1211 aa AA seqDB search MLRAIFRFLVSRDLWVFLGLLAVAFLIWIIGPVIAVGRYRPFESEFVRIVVIALMFAIWI ARVLYRKWRERRLNAQLLNQLRTPSPKEKAAKPEDAPEIKELQSGFTDATSILKNMRFGA DAGGKPAGRFALFDRQYLYQLPWYIFIGAPGSGKTTALVNSDLDFPLADQLGKAAVRGIG GTRNCDWWFTNEAVLIDTAGRYTTHESNRETDEGEWKGFLDLLKKFRPRQPINGAILTIS IADLPLADDAQRARHAMALRKRLLELRNGLGINFPVYVLVTKTDLLAGFNEYFGALGRAE RSQVWGFTFPIDANPADPAKADLRERFHQEYKLLHQRLDERLPELLAAEPDQLRRAQAYL LPQQFASFEDILGTFLADVFNPSKFEVAPMLRGVYFTSGTQEGTAFDRVMGAIKRYLQVN APPAPPPGPGKSYFLKELLQQVIFRDAGVAGTNLRWYRRKRAIDLAGYGLIGVLLVVVLG ACVNSWRNNRDYVAEVDTNAKAFNKAAARGELPTVVDSNSDIASSLPVLDRLRDLPKSSH FDIGDPPMGYRFGLYQGEKLQAATDGVYQRALEGVLLPQAAQRVEQALREASKTDAEYSY EALKAYLMLYDAERYDADFLQAWLLTDVDRKIGAGLTREQRTNLESHLKALFAERVVTSP FAKDDRLVTETRNRLAGVPLAQRAYARLRRILLQTSPPNAFSIAEAAGAESALVIKRTSG KPLTDGIPTLFTYRGYWDIFDKRMAETTLALEQEDRWVLQIRAPGMADITSRELLLREVR RLYLTDYIRVWDDYLLDVRLADSRSLLQSIQMTRVLSTSESPMSRLIRGAARETDLLRNH DEATRSLLDQAQNRVASTRERIEQLIGQPDGSQRRNTVPDRPESLVDNHFAPLRRMVTAP KAGGQAPIDATAALINELYTFLTATDTALRSGNIPPSSDAVTKVQAEAGRLPVPFQGMLN DLSATASSKAAAVTRQNIGQNAAATIGQFCSQAIAGRYPFSRGSNRDVAAGDFAQLFAPG GMMDDFFQKNLASQVDTSVNPWAFKKGVDGSSPGRSAYLDSFQKAQAIRDVFFSGMAGGR TPSFTIDIRPEDMDAAISQFTLDIDGQTVRYAHGPQAPSTVKWPGPRNSNQVRLQVTTAS GTPAGGIVTEGPWALHRLFDKASISSGSAPESFNATFDLQGKKVVLAVTANSVYNPLRLH QMNGFSCPGKS NT seq 3636 nt NT seq  +upstreamnt  +downstreamnt atgctgcgcgcgattttccgttttctcgtgagccgcgacctgtgggtctttctcgggctg ctggccgttgcgttcctgatctggatcatcggccccgtcattgcggtgggccgctaccgg ccgttcgaaagcgagttcgtgcgcatcgtggtgatcgcgctgatgttcgcgatctggatc gcgcgcgtgctctaccgcaagtggcgcgagcggcgcctcaatgcgcagctgctcaaccag ctgcgcacgccgtcgcccaaggagaaggccgccaagcccgaggatgcgcccgagatcaag gagctgcaaagcggcttcaccgacgccacgtccatcctgaagaacatgcgtttcggcgcc gatgccggcggcaagcccgcggggcgcttcgcgctgttcgaccgccagtacctgtaccag ctgccctggtacatcttcatcggcgcgccgggctcgggcaagaccaccgcgctggtcaac tccgacctcgacttcccactggccgaccagctcggcaaggccgcggtgcgcggcatcggc ggcacgcgcaactgcgactggtggttcaccaacgaggcggtgctgatcgacaccgccggg cgctacaccacgcacgagagcaaccgcgagaccgacgagggcgagtggaagggcttcctc gacctgctcaagaagttcaggccgcgccagccgatcaacggtgccatcctcaccatcagc attgccgacctgccgctggccgacgacgcgcagcgcgcgcgccacgcgatggcgctgcgc aagcggctgctcgaactgcgcaacggcctgggcatcaattttccggtgtacgtgctggtc accaagaccgacctcttggccggcttcaacgagtacttcggcgcgctcggccgcgccgag cgctcgcaggtctggggcttcaccttcccgatcgatgccaaccccgcagacccggccaag gccgacctgcgcgagcgcttccaccaggaatacaagctgctgcaccagcgcctggacgag cgcctgccggaactgctggcggccgagcccgaccagctgcgccgcgcgcaggcctacctg ctgccgcagcagttcgcgagcttcgaggacatcctgggcaccttcctggccgacgtgttc aacccctcgaagttcgaagtcgcgccgatgctgcgcggcgtgtacttcaccagcggcacg caggagggcacggctttcgaccgcgtgatgggcgcgatcaagcgctacctgcaggtcaac gcgccgcccgcgccgccgccgggcccgggcaagagctacttcctcaaggagctgctgcag caggtgatcttccgcgacgcgggcgtggccggcaccaacctgcgctggtaccggcgcaag cgcgccatcgacctcgcgggctacggcctcatcggcgtgctgctggtggtggtgctgggc gcctgcgtgaacagctggcgcaacaaccgcgactacgtggccgaggtcgacaccaacgcc aaggccttcaacaaggccgcggcgcgcggcgaactgccgacggtggtcgattccaacagc gacatcgcgagctcgctgcccgtgctcgaccgcctgcgcgacctgcccaagtcgagccat ttcgacatcggcgatccgcccatgggctatcgcttcggcctctaccagggcgagaagctg caggccgcgaccgacggcgtctaccagcgcgcgctcgaaggcgtgctgctgccgcaggcc gcgcagcgcgtggagcaggcgctgcgcgaggcctccaagaccgatgccgaatacagctac gaggcgctcaaggcctacctcatgctgtacgacgcggagcgctacgacgccgactttctc caggcctggctgctcaccgacgtggaccgcaagatcggcgccggcctcacgcgcgagcag cgcaccaacctcgagtcgcacctgaaggcgctgttcgccgaacgcgtggtgacctcgccc ttcgccaaggacgaccggctcgtcaccgagacgcgcaaccgcctggccggcgtgccgctg gcgcagcgcgcctatgcgcggctgcggcgcatcctgctgcagaccagtccgcccaatgcc ttcagcatcgcggaggcggcgggggccgagtcggcgctggtgatcaagcgcacgagcggc aagccgctcaccgacggcatcccgacgctgttcacctaccgcggctactgggacatcttc gacaagcgcatggccgagaccacgcttgcgctcgaacaggaagaccgctgggtgctgcag atccgcgcgcccggcatggccgacatcacctcgcgcgagctgctgctgcgcgaggtgcgc cggctctacctcaccgactacatccgcgtctgggacgactacctgctcgacgtccggctg gccgacagccgctcgctgctgcagagcatccagatgacgcgcgtgctctcgaccagcgag tcgccgatgtcgcgcctcatccgcggcgcggcgcgcgagaccgacctgctgcgcaaccac gacgaagccacgcgcagcctgctcgaccaggcgcagaaccgcgtggccagcacgcgcgag cgcatcgagcagctcatcgggcagcccgacggcagccagcgccgcaacaccgtgccggac cgccccgaatcgctggtggacaaccacttcgcgccgcttcgccgcatggtcaccgcgccc aaggccggcggccaggcgccgatcgacgcgacggccgcgctcatcaacgagctctacacc ttcctcaccgccaccgacacggcattgcgcagcggcaacatcccgccatcgagcgacgcg gtcaccaaggtgcaggccgaggcgggccgcctgccggtgccgttccagggcatgctgaac gacctctcggccaccgcgtcgtccaaggcggcggcggtgacgcggcagaacatcgggcag aacgcggccgccaccatcggccagttctgcagccaggccattgcggggcgctatccgttc tcgcgcggctcgaaccgcgacgtggccgccggcgacttcgcgcagctgttcgcgccgggc ggcatgatggacgacttcttccagaagaacctggcctcgcaggtcgacacctccgtcaac ccctgggccttcaagaagggcgtggacggcagctcgccggggcgctcggcgtacctcgat tcgttccagaaggcgcaggcgatccgcgacgtgttcttctcgggcatggcgggcgggcgc acgccctcgttcaccatcgacatccggcccgaggacatggacgccgccatcagccagttc acgctcgacatcgacggccagacggtgcgctatgcgcacggaccgcaggcgcccagcacc gtcaagtggcccggcccgcgcaacagcaaccaggtgcggctgcaggtgacgaccgccagc ggcacgccggccggcggcatcgtcaccgaagggccgtgggcgctgcaccggctgttcgac aaggcctccatttcgtcgggcagcgcgcccgaatcgttcaacgcgaccttcgacctgcaa ggcaagaaggtggtgctcgcggtgacggcgaacagcgtctacaacccgctgcgcctgcac cagatgaacggcttttcgtgccccgggaaatcctga

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