Variovorax paradoxus S110: Vapar_0251
Help
Entry
Vapar_0251 CDS
T00916
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
vap
Variovorax paradoxus S110
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
vap03400
]
Vapar_0251
DNA repair and recombination proteins [BR:
vap03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Vapar_0251
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
AAA_22
ChlI
AAA_16
Lon_C
DnaB_C
RecA
AAA_30
GvpD_P-loop
DUF7125
Rad51
NPHP3_N
SLFN-g3_helicase
NTPase_1
AAA_5
AAA_14
AAA_29
AAA_24
ATPase_2
nSTAND3
NACHT
DUF7129
Motif
Other DBs
NCBI-ProteinID:
ACS16914
UniProt:
C5CXB0
LinkDB
All DBs
Position
1:271235..272623
Genome browser
AA seq
462 aa
AA seq
DB search
MAKEKTLFVCSECGGTSPKWLGKCPSCGAWNTLIEQVAGGSGPANNRFGTQYAALAGVSE
LATLSEIEATDVARTPTGLDELDRVLGGGIVSGGVTLIGGDPGIGKSTLLLQAVDALQRA
GQNALYVTGEESGAQVALRSRRLGLDHSQVQVLAEIQLEKIIATLDATRPAIAVIDSIQT
VYSDQLTSAPGSVAQVRECAAHLTRFAKTSGTAVVLVGHVTKEGALAGPRVLEHMVDTVL
YFEGDTHSSFRLVRAIKNRFGAVNEIGVFAMTERGLKGVANPSAIFLSQHAEPVPGSVVL
VTLEGTRPMLVEIQALVDNGGPSPRRLSVGLDRDRLAMLLAVLHRHAGVACMDQDVFVNA
VGGVRISEPAADLAVMLAITSSLRGKPLPRGFIAFGEVGLAGEVRPAPRGQERLREAAKL
GFSVAVVPKANAPRKGTKEIEGLTIHAVERIEEAMDVVRRLD
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atggccaaggaaaaaactctcttcgtctgcagcgaatgcggcggcaccagccccaagtgg
ctcggcaaatgcccgagctgcggcgcctggaacacactcatcgaacaggtggcgggcggc
agcggcccggccaacaaccgcttcggcacgcagtacgccgcgctggcgggcgtgtcggag
ctcgcaaccctttccgaaatcgaagcgaccgacgtcgcgcgcacgcccaccgggctcgac
gagctcgaccgcgtgctgggcggcggcatcgtctcgggcggcgtcacgctgatcggcggc
gacccgggcatcggcaagtcgaccttgctgctgcaggcggtcgatgcgctgcagcgcgcg
gggcagaacgcgctctacgtcacgggcgaggaaagcggcgcgcaggtggcgctgcgttcc
aggcggcttggcctggaccactcgcaggtgcaggtgctggccgagatccagctcgagaag
atcatcgccacgctcgacgccacgcgcccggccatcgcggtgatcgactcgatccagacc
gtgtactccgaccagctcacctccgcgccgggctcggtggcccaggtgcgcgaatgcgcg
gcccacctcacgcgctttgccaagaccagcggcacggccgtggtgctggtgggccacgtc
accaaggagggcgcgcttgccggaccgcgcgtgctcgagcacatggtcgacacggtgctg
tacttcgagggcgacacgcattcgagctttcgcctcgtgcgcgccatcaagaaccgcttc
ggcgccgtcaacgagatcggcgtgttcgccatgaccgagcgcggcctgaagggcgtcgcc
aacccgagcgcgatcttcctgagccagcatgccgagccggtgcccggcagcgtggtgctg
gtcacgctcgagggcacgcggccgatgctggtggagatccaggcgctggtcgacaacggc
gggccgagcccgcgccgcctctcggtaggcctggaccgcgaccggctcgcgatgctgctg
gccgtgctgcaccgccatgcgggcgtggcctgcatggaccaggatgtgttcgtgaacgcg
gtgggcggcgtgcgcatcagcgagcccgcggccgacctggccgtgatgctcgccatcacc
tcgagcctgcgcggcaagccgctgcccaggggattcatcgcattcggcgaggtcggcctt
gcgggcgaagtgcgccccgcgccgcgcggccaggagcgcctgcgcgaagcggccaagctg
ggcttcagcgtggccgtggtgcccaaggcgaatgcgccgcgcaagggcacgaaggagatc
gaaggtctgacgatccatgccgtagaacgtatcgaggaggcgatggacgtggtccgccgc
ctggattaa
DBGET
integrated database retrieval system
