Variovorax paradoxus S110: Vapar_0307
Help
Entry
Vapar_0307 CDS
T00916
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K02054
putative spermidine/putrescine transport system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
Vapar_0307
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_0307
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
Vapar_0307
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
Motif
Other DBs
NCBI-ProteinID:
ACS16970
UniProt:
C5CY66
LinkDB
All DBs
Position
1:complement(328398..329249)
Genome browser
AA seq
283 aa
AA seq
DB search
MKSKATPWWLSGPALLLFAALLVVPLALTAVLSFNVYDPATGPKAGEFTLAHYAQVFTDS
YYHGIFWRTFWISALVTLICVLVGAPEAYVLSRMRNPWRSVLLLVVLAPLLVSVVVRAFG
WSMLLGPEGAVNGLLRLVGIGPVKMLYTETAVIVALVHVMLPFMVIPVWTSLQKLDAGVE
NAALSLRASPFTTLRRIVLPQVMPGILSGSLIVFGLAASSFAIPGLLGGRRLKMVATVVY
DEYLSELNWPLGAAVALTLLVANLIVMLSYNRLVEGRYKKALG
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaagagcaaggccacgccctggtggctgtcggggcccgcgctactgctgttcgcagcc
ctgctggtggtgccgctcgcgctcaccgcagtgctgtcgttcaacgtctacgacccggcc
acggggccgaaggccggcgagttcacgctcgcgcactacgcccaggtgttcaccgactcg
tactaccacggcatcttctggcgcaccttctggatctcggccctcgtcaccctgatctgc
gtgctggtcggcgcgcccgaggcctacgtgctgagccgcatgcgcaacccgtggcgctcg
gtgctgctgctggtggtgctggcgccgcttttggtgtcggtggtggtgcgcgccttcggc
tggagcatgctgctcgggcccgaaggcgcagtgaacgggctgctgcggctggtgggcatc
gggccggtgaagatgctctacaccgagaccgcggtgatcgtcgcgctggtgcacgtgatg
ctgcccttcatggtgattccggtctggacctcgctgcagaagctggatgcgggcgtggag
aacgcggcgctctcgctcagggcctcgcccttcaccacgctgcggcgcatcgtgctgccg
caggtgatgccgggcattctctcgggcagcttgatcgtgttcggcctggctgcgagttcg
ttcgcgattccggggctgctgggcgggcgccgattgaagatggtggcgacggtggtctat
gacgagtacctgagcgagctcaactggccgctcggcgctgctgtcgcgctgacgctgctc
gtagccaacctcatcgtgatgctgagctacaaccggctcgtcgaaggccgctacaagaag
gcattggggtga
DBGET
integrated database retrieval system
