Variovorax paradoxus S110: Vapar_0342
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Entry
Vapar_0342 CDS
T00916
Name
(GenBank) inner-membrane translocator
KO
K10440
ribose transport system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_0342
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_0342
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Vapar_0342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_2
Motif
Other DBs
NCBI-ProteinID:
ACS17005
UniProt:
C5CYA1
LinkDB
All DBs
Position
1:complement(368600..369580)
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AA seq
326 aa
AA seq
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MNATATHPTPPAPDGGLFTQLRRSTAFLPLVGLVAISVFMIAATDNFLSWGNLQNIALQS
SINAIIAVGMTAAILTGGIDLSVGAVVALSGTLASGMMVQFGLPPVLAVPLGLAVGVVIG
LFNGYCVAYLRMPPIIVTLATMGIARGIALIYTGGYPIDGLPDSFAFLGGGVLAGIKVPI
LIMLATYLVAYVLLNMAPFGRYVYAIGGNEEATRLSGVRVSRYKLLVYALSGFTAAVAGI
VQAARVTSGQPGVGVGFELDAIAAVVMGGTSIAGGRGAIVGTLVGALLLGVLNNGLNMIG
VSPYLQLIIKGGIVLLAIFISREAKR
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcaaccgccacccacccgacaccgccagcacccgatggaggactcttcacccaa
ttgcgccgctcgaccgccttcctcccactggtcggactggtagcgatctcggtcttcatg
atcgccgcgaccgacaacttcctgtcctggggcaacctgcagaacatcgcgctgcagtcg
tcgatcaacgccatcatcgcggtcggcatgaccgcagccatcctcaccggcggcatcgat
ctttcggtgggcgcggtggtggcgctctccggcacgctggcctcgggaatgatggtgcag
ttcgggctgccgccggtgctcgccgtgccgctcggcctcgccgtcggcgtggtgatcggc
ctcttcaacggttactgcgtggcctacctgcgcatgccgcccatcatcgtgacgctcgcc
accatgggcatcgcgcgcggcattgcgctcatctacaccggcggctatccgatcgatgga
ttgcccgattcgttcgccttcctcggcggcggcgtgctcgcgggcatcaaggtgccgatc
ctcatcatgctcgcgacctacctcgtggcgtatgtgctgctcaacatggcgcccttcggc
cgctacgtgtatgccatcggcggcaacgaggaagcgacgcggctctcgggcgtgcgcgtg
tcgcgctacaagctgctcgtgtatgcgctgagcggcttcaccgccgccgtcgcaggcatc
gtgcaggcggcgcgcgtgaccagcgggcagcccggcgtgggcgtgggcttcgagctcgac
gcgatcgcggcggtggtgatgggcggcacgtccattgccggcgggcggggcgcaatcgtc
ggcacgctggtcggtgcgctgctgctgggcgtgctgaacaacgggctcaacatgatcggc
gtgtcaccgtacctgcaattgatcatcaagggcggcattgtcttgctcgccatcttcatc
agccgcgaagccaaacgctga
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