Variovorax paradoxus S110: Vapar_0373
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Entry
Vapar_0373 CDS
T00916
Name
(GenBank) sugar ABC transporter
KO
K10439
ribose transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_0373
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Vapar_0373
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_0373
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
Vapar_0373
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
TAT_signal
Toprim_3
Motif
Other DBs
NCBI-ProteinID:
ACS17036
UniProt:
C5CYD2
LinkDB
All DBs
Position
1:complement(403003..404043)
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AA seq
346 aa
AA seq
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MRRNFLKSAAAAGIGLAGTSAFAQSTPTPAATGLRGNASDVYVMNVMVSGVEYWFPVYEM
MKQLGRTLGVRTRYTGTPEYDVNKQLASFEQELARKPAGILLHPMNPDPFIEPINRAVAM
GIPVVTFAADSPNSKRASFVTSDNDREGTQAADAIAAALGGKGEYAVLENPGQDNHDRRI
AAFVNRMKTKHAGMKLVGRAASNQDPSKAYQAVLSLAQANPNLGALFMPEANSALGAAQA
KIESKKNIRVMCCDVNAKILDMIKAGDVFGAINPNQGMQGYMGMMMLFLAKNPSLIDPMN
DAKRNGTNPMSVPFLDNGLSVVSKANADDFYWDKYLARRGTKGIGE
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaggcgaaatttcctgaagtccgctgcggccgccggtatcggcctggccggcaccagc
gcatttgcgcaatccacccccacgcccgccgccaccggattgcgcggcaacgcgagcgac
gtctacgtgatgaacgtgatggtgtcgggcgtcgaatactggtttccggtctacgagatg
atgaagcagctgggccgcacgctgggcgtgcgcacgcgctacaccggtacgcccgagtac
gacgtgaacaagcagctggcctccttcgagcaggagctggcgcgcaagcccgcgggcatc
ctgctgcacccgatgaaccccgatccgttcatcgagccgatcaaccgggcggtggccatg
ggcatcccggtcgtgaccttcgcggccgactcgcccaactccaagcgcgcttccttcgtc
acgtctgacaacgaccgcgagggcacgcaggcggccgacgcgattgccgcggcgctgggc
ggcaagggcgaatacgcggtgctcgagaacccgggccaggacaaccacgaccgccgcatc
gcggccttcgtcaaccgcatgaagaccaagcacgcgggcatgaagctggtcggccgcgcc
gccagcaaccaggacccgagcaaggcctaccaggcggtgctgagcctggcgcaggccaac
ccgaacctgggtgcgctgttcatgcccgaggccaactcggcgctgggcgccgcgcaggcc
aagatcgagtcgaagaagaacatccgcgtgatgtgctgcgacgtgaacgccaagatcctc
gacatgatcaaggccggcgacgtgttcggcgccatcaatccgaaccagggcatgcagggc
tacatgggcatgatgatgctgttcctggccaagaacccctcgctcatcgatccgatgaac
gacgccaagcgcaacggcaccaatccgatgtcggtgccgttcctggacaacggcctgtcg
gtggtcagcaaggccaatgccgacgacttctactgggacaagtacctcgcgcgccgcggc
accaagggaatcggcgagtga
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