Variovorax paradoxus S110: Vapar_0396
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Entry
Vapar_0396 CDS
T00916
Name
(GenBank) binding-protein-dependent transport systems inner membrane component
KO
K12370
dipeptide transport system permease protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_0396
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_0396
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
Vapar_0396
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
Motif
Other DBs
NCBI-ProteinID:
ACS17059
UniProt:
C5CJ59
LinkDB
All DBs
Position
1:428124..429035
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AA seq
303 aa
AA seq
DB search
MATTTPHAVSGSAGGAAPPGPWREFWTAFSANRGAVIGLATVALLLLVALFAPWIAPHAP
NETNSAVFLLPPAWQQGGSASYLLGTDAIGRDILSRLMHGARLSLSIGVAVVALSVVVGV
VLGLVAGFFRGVLEIAIMRLMDIVLTMPSLLMAIVIVAILGPGLVNAMVAVAIVVLPHYV
RITRAAVIAEISRDYVTAARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAAL
GFIGLGAQPPSPEWGTMLADAREFVLRAWWVVTFPGLAILAAVLAFNLLGDGLRDALDPK
LKR
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atggcaacgacgacaccccacgcagtttcgggcagcgccggcggcgcagcgcctcccggc
ccctggcgcgagttctggaccgccttctcggccaatcgcggcgcggtgatcggccttgcc
accgtcgcgctgctgctgctggtggcgctgttcgcgccgtggatcgcgccgcatgcgccc
aacgagaccaacagcgccgtcttcctgctgccgccggcatggcagcagggcggctccgca
agctacctgctgggcaccgacgccatcgggcgcgacattctttcgcggctgatgcacggc
gcgcggctctcgctgtccatcggcgtggcggtggtggcgctgtcggtggtcgtcggcgtg
gtgctcggccttgtcgcgggcttctttcgcggcgtgctggagatcgcgatcatgcggctg
atggacatcgtgctcacgatgccgagcctgctgatggccatcgtgatcgtcgcgatcctc
gggccggggctggtcaatgccatggtggcggtggccatcgtcgtgctgccgcactatgtg
cgcatcacgcgcgccgcggtcattgccgagatctcgcgcgactacgtgaccgccgcgcgc
gtgagcggcgccggcacgctgcgtctgatgttccgcgaggtgctgcccaactgcgcggcg
ccgctgatcgtgcaggcctcgctcggcatctccacggccatcctcgatgcggcggcgctg
ggcttcatcggcctgggcgcgcagccgccgtcgcccgaatggggaacgatgctggccgat
gcgcgcgagttcgtgctgcgcgcctggtgggtcgtgacttttccggggctcgcgatcctc
gcggccgtgctggccttcaacctgctcggcgacggcctgcgcgatgcgctcgatcccaaa
ctgaaacgatga
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