Variovorax paradoxus S110: Vapar_0399
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Entry
Vapar_0399 CDS
T00916
Name
(GenBank) extracellular solute-binding protein family 5
KO
K12368
dipeptide transport system substrate-binding protein
Organism
vap
Variovorax paradoxus S110
Pathway
vap02010
ABC transporters
vap02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Vapar_0399
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
Vapar_0399
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
vap02000
]
Vapar_0399
Transporters [BR:
vap02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Dipeptide transporter
Vapar_0399
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ACS17062
UniProt:
C5CJ62
LinkDB
All DBs
Position
1:431143..432783
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AA seq
546 aa
AA seq
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MKKTTQPSVSRRSPRLGALLAPAALAMLALGAGAVSAKTLVYCSEGSPENFYPGVNTTGT
SFDVTTQVYNTIVEFERGGTKVVPGLAEKWDISADGTVYTFHLRKGVKWHSTSKSFKPTR
DFNADDFIFMLERQWKESDPFFKVTSQNHSYFNDMGMPKLLKSVDRIDDLTVKITLNQAE
APFLANLAMQYAGIQSKEYAIAMLKAGTPEKVDQDPIGTGPFYLVQYQKDAVIRFKAFPQ
YWGGKAKIDDLVFAITPDASVRWAKLQKGECHVMPYPNPADLDAIRKDPNVQVLEQPGLN
VGYLSYNTTKKPFDDVRVRKAINMAINKKAIIDGVYLSTGVAAKNPIPPTMWSYNDAVKD
DPYDPEAAKKLLAQAGFPDGFSTDLWAMPVQRPYNPNAKRIAELMQADLAKINVKAEIKS
FEWGEYRKRLQAGEHQMGMLGWTGDNGDPDNFLYTLLGCASAKSASGSNISKFCYQPYED
LVLKAKSATKQAERDALYKKAQVIFKEQAPWFTIAHAVQLKPVRKEVVDFKLSPFGRHTF
YGVDIK
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagaccacccagccatccgtttcgcgccgctcgcccaggcttggcgcgctgctc
gcgccggcggcactcgccatgctcgcactgggcgcgggcgccgtgtccgccaagacgctg
gtctattgctcggagggcagtcccgagaacttctatccgggcgtcaacaccaccggcacc
tcgttcgacgtgaccacgcaggtctacaacaccattgtcgagttcgagcgcggcggcacc
aaggtcgtgccgggcctggctgaaaaatgggacatctccgccgatggcacggtctacacc
ttccacctgcgcaagggcgtcaagtggcacagcaccagcaagagcttcaagcccacgcgc
gacttcaacgccgacgacttcatcttcatgctcgagcggcagtggaaggagagcgatccc
ttcttcaaggtcacgagccagaaccactcctacttcaacgacatgggcatgcccaagctc
ctgaagtcggtggaccgcatcgacgacctgaccgtgaagatcacgctcaaccaggccgag
gcgccgttccttgccaacctggccatgcagtacgcgggcatccagtcgaaggaatacgcc
attgcgatgctgaaggccggcacgcccgagaaggtcgaccaggacccgatcggcaccggc
ccgttctacctcgtgcaataccagaaggacgcggtcatccgcttcaaggccttcccgcag
tactggggcggcaaggcgaagatcgacgacctcgtgttcgcgatcacgcccgatgcctcg
gtgcgctgggccaagctgcagaagggcgaatgccacgtcatgccgtatccgaatccggcc
gatctcgacgcgatccgcaaggacccgaacgtgcaggtgctcgagcagcctggcctcaac
gtgggctacctttcgtacaacaccaccaagaagcccttcgacgacgtgcgcgtgcgcaag
gccatcaacatggcgatcaacaagaaggcgatcatcgacggcgtgtacctgtcgaccggc
gtggccgcgaagaacccgatcccgcccaccatgtggtcctacaacgacgcggtcaaggac
gatccctacgaccccgaagccgccaagaagctgctggcgcaggccggctttcccgatggc
ttctcgaccgacctgtgggccatgccggtgcagcggccctacaacccgaatgccaagcgc
atcgccgagctgatgcaggccgaccttgccaagatcaacgtcaaggccgagatcaagagc
ttcgagtggggcgagtaccgcaagcgcctgcaggccggcgagcaccagatgggcatgctc
ggctggaccggcgacaacggcgaccccgacaacttcctctacacgctgctgggctgcgcc
tcggccaagtcggccagcggcagcaacatctccaaattctgctaccaaccctacgaagac
ctcgtgctcaaggccaagagcgcgaccaagcaggccgagcgcgatgcgctctacaagaag
gcgcaagtcatcttcaaggagcaggcgccgtggttcaccatcgcgcacgcggtgcagctg
aagccggtgcgcaaggaggtggtcgacttcaagctcagccccttcggccgccacaccttc
tacggcgtggacatcaagtag
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