Variovorax paradoxus S110: Vapar_0415
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Entry
Vapar_0415 CDS
T00916
Name
(GenBank) 1,4-alpha-glucan branching enzyme
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
vap
Variovorax paradoxus S110
Pathway
vap00500
Starch and sucrose metabolism
vap01100
Metabolic pathways
vap01110
Biosynthesis of secondary metabolites
Module
vap_M00565
Trehalose biosynthesis, D-glucose 1P => trehalose
vap_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
vap00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
Vapar_0415
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
vap04147
]
Vapar_0415
Enzymes [BR:
vap01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
Vapar_0415
Exosome [BR:
vap04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
Vapar_0415
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Gene cluster
GFIT
Motif
Pfam:
GlgB_N
CBM_48
Alpha-amylase_C
Alpha-amylase
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
ACS17078
UniProt:
C5CJ78
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All DBs
Position
1:complement(450146..452317)
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AA seq
723 aa
AA seq
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MPSLLLPEREVHALMRAEHGDPFAVLGPHETRDGLLVRALLPGAQSVAVVHTRTGWPLAL
LSRQEGSDLFAGLVPAAEALLGYSFQVDWGTHSSRLEDPYRFAFVLGATDVWLLAEGTHL
RPWERLGAHLCEMDGVKGVAFAVWAPNARRVSVVGDFNNWDGRRHMMRLRRECGVWEIFA
PQLATGDSYEFEILSAQGEVLRKADPFAFSSRLRPETACVVAPLPAPVAMPPERAAANGR
HAPMSIYEVHLGSWRRKNGHEWLDYRELADTLVPYARDMGFTHIELLPVSEHPFDGSWGY
QPIGLYAPTSRFGTPGDFRHLVEAAHAAGLGVILDWVPAHFPTDAHGLGRFDGTALYEYA
DPREGFHNDWKTFIFNYGRTEVRNYLVGNALYWLERYGVDGLRVDAVASMLYRDYSRQPG
EWVPNIHGGRENLEAIDFLRRMNRVVGVERPGAITLAEESTSFPGVTRPPEDGGLGFHYK
WNMGWMNDTLAYAGIDPVHRKHHHQKITFGLMYAHSENFVLPLSHDEVVHGKGSMFGRMP
GDEWQKFAGLRNLYGYLWAYPGKKLLFMGNEFAQVAEWNADRSLDWHLLEQAPHQGMRRL
VRDLNNVYRHFPALHELDTERAGFEWLVHDDREQSVFAFVRRAQGGSFVVAVCNFTPLPR
HGYRLGVPAAGAYREAINTDGAVYGGSGVGNGVVDSEPVPWHGRADSILISVPPLATVMW
VLA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgccttccctgctgctgcccgaacgcgaagtgcacgcgctgatgcgcgccgagcacggc
gatccgttcgcggtgctcggtccgcacgagacgcgcgacggcctgctggtgcgcgcgctg
ctgccgggcgcgcagagcgtggccgtggtgcacacgcgcacgggctggccgctggcgctg
ctgtcgcggcaggaaggctccgatctttttgccggactggtgcccgcggccgaggcgctg
ctgggctattcgttccaggtcgactggggcacgcacagctcgcggctcgaagacccgtac
cgctttgcgttcgtgctgggtgccaccgacgtatggctgctggccgagggcacgcacctg
cgaccctgggagcggctgggcgcacacctgtgcgagatggatggcgtcaagggcgtggcc
ttcgcggtctgggcgcccaatgcgcggcgcgtctcggtggtcggcgacttcaacaactgg
gacggccggcgccacatgatgcggctgcgccgcgaatgcggcgtgtgggaaatcttcgcg
ccgcagctggccacgggcgacagctacgaattcgagatcctctcggcccagggcgaggtg
ctgcgcaaggccgatcccttcgccttctcctcgcgcctgcggcccgagaccgcctgcgtg
gtcgcgccgctgcccgcgcccgtcgccatgccgcccgaacgcgccgccgccaacggccgc
catgcgccgatgagcatctacgaggtgcacctgggctcctggcgccgcaagaacggccat
gaatggctggactaccgcgagctggccgacacactggtgccgtacgcgcgcgacatgggc
ttcacgcacatcgagctgctgccggtcagcgagcatccgttcgacggctcctggggctac
cagccgatcggcctgtatgcgcccacctcgcgcttcggcacgcccggcgacttccgccat
ctggtcgaagccgcgcatgccgcgggcctgggcgtgatcctcgactgggtgcccgcgcac
ttccccaccgacgcgcacggcctgggccgcttcgacggcaccgcgctctatgaatacgcc
gatccgcgcgagggcttccacaacgactggaagaccttcatcttcaactacggccgcacc
gaggtgcgcaactacctggtcggcaatgcgctgtactggctcgagcgctacggcgtcgac
ggactgcgcgtcgacgccgtggcctccatgctctaccgcgactacagccgccagcccggc
gaatgggtgcccaacatccacggcgggcgcgagaatctcgaggccatcgacttcctgcgg
cgcatgaaccgggtggtgggcgtcgagcgcccgggcgccatcacgctggccgaggagtcc
acgagctttccgggcgtgacgcggccgcccgaggacggcggcctgggcttccactacaaa
tggaacatgggctggatgaacgacacgctcgcctatgcgggcatcgacccggtccaccgc
aagcaccaccaccagaagatcaccttcggcctgatgtatgcgcacagcgagaacttcgtg
ctgccgctctcgcacgacgaggtggtgcacggcaagggctcgatgttcggccgcatgccc
ggcgacgagtggcagaagttcgcggggctgcgcaatctttatggctacctctgggcctat
ccgggcaagaagctgctgttcatgggcaatgaattcgcccaggtggcggaatggaacgcc
gaccgcagcctcgactggcacctgctcgagcaggcgccgcaccagggcatgcggcggctg
gtgcgcgacctcaacaacgtgtaccggcacttccccgcgctgcacgagctcgacaccgaa
agggccggcttcgagtggctggtgcatgacgaccgggagcagtcggtcttcgccttcgtg
cgccgggcccagggcggctccttcgtggtggcggtgtgcaacttcacgccgctgccgcgc
cacggctaccggcttggcgtgcccgcggcgggcgcctaccgcgaggccatcaacaccgac
ggcgccgtgtacggcggcagcggtgtcggcaacggcgtggtcgacagcgaaccggtgccc
tggcacggccgggccgattcgattctcatcagcgtgccgcccctggccaccgtgatgtgg
gtgctggcctga
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